BLASTN 2.0MP-WashU [08-Nov-2004] [sol8-sparc-ILP32F64 2004-11-08T14:57:24] Copyright (C) 1996-2004 Washington University, Saint Louis, Missouri USA. All Rights Reserved. Reference: Gish, W. (1996-2004) http://blast.wustl.edu Notice: this program and its default parameter settings are optimized to find nearly identical sequences rapidly. To identify weak protein similarities encoded in nucleic acid, use BLASTX, TBLASTN or TBLASTX. Query= seq1 (1448 letters; record 1) Database: intergenic.fna 6414 sequences; 3,015,920 total letters. Searching....10....20....30....40....50....60....70....80....90....100% done Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N NOT:H_528618-530048 Chromosome 8 from 528618 to 530048 5206 5.7e-285 2 NOT:A_22687-24001 Chromosome 1 from 22687 to 24001 6323 2.4e-282 1 NOT:A_208654-209439 Chromosome 1 from 208654 to 209439 3587 1.5e-158 1 NOT:A_208007-208358 Chromosome 1 from 208007 to 208358 1215 4.5e-51 1 NOT:Q_802-3952 Chromosome Mito from 802 to 3952 294 7.2e-06 1 NOT:Q_66285-67061 Chromosome Mito from 66285 to 67061 286 7.3e-06 1 NOT:Q_75984-77431 Chromosome Mito from 75984 to 77431 253 0.00046 1 NOT:Q_51429-54109 Chromosome Mito from 51429 to 54109 233 0.0047 1 NOT:Q_46953-48201 Chromosome Mito from 46953 to 48201 228 0.0063 1 NOT:Q_54438-58009 Chromosome Mito from 54438 to 58009 223 0.014 1 NOT:Q_71503-72630 Chromosome Mito from 71503 to 72630 220 0.014 1 NOT:Q_26701-27666 Chromosome Mito from 26701 to 27666 219 0.015 1 NOT:Q_31014-35373 Chromosome Mito from 31014 to 35373 215 0.033 1 NOT:Q_4415-6546 Chromosome Mito from 4415 to 6546 208 0.062 1 NOT:Q_50097-51052 Chromosome Mito from 50097 to 51052 204 0.071 1 NOT:Q_29266-30874 Chromosome Mito from 29266 to 30874 205 0.079 1 NOT:F_104456-104695 Chromosome 6 from 104456 to 104695 147 0.18 1 NOT:L_673336-673830 Chromosome 12 from 673336 to 673830 186 0.24 1 NOT:Q_78608-79213 Chromosome Mito from 78608 to 79213 178 0.59 1 NOT:Q_9447-11667 Chromosome Mito from 9447 to 11667 180 0.72 1 NOT:Q_35444-36540 Chromosome Mito from 35444 to 36540 177 0.77 1 NOT:D_149087-149204 Chromosome 4 from 149087 to 149204 132 0.86 1 NOT:C_75285-76131 Chromosome 3 from 75285 to 76131 172 0.89 1 NOT:Q_43647-46723 Chromosome Mito from 43647 to 46723 174 0.92 1 NOT:Q_62447-63862 Chromosome Mito from 62447 to 63862 172 0.93 1 NOT:C_40724-42165 Chromosome 3 from 40724 to 42165 171 0.95 1 NOT:Q_64670-65770 Chromosome Mito from 64670 to 65770 169 0.97 1 NOT:P_264191-264601 Chromosome 16 from 264191 to 264601 157 0.996 1 >NOT:H_528618-530048 Chromosome 8 from 528618 to 530048 Length = 1431 Minus Strand HSPs: Score = 5206 (787.2 bits), Expect = 5.7e-285, Sum P(2) = 5.7e-285 Identities = 1116/1206 (92%), Positives = 1116/1206 (92%), Strand = Minus / Plus Query: 1203 ATTTTATTTATTTATTTAANNNNNNNNNNNNNNNNNNNNNNNNGATTTATATCCTGCAAA 1144 ||| ||||||||| || | | ||||||||||||||| Sbjct: 237 ATTGTATTTATTTTATTTATTTATTTAATTTTTTTTTTTTTTGG-TTTATATCCTGCAAA 295 Query: 1143 CAACACTTCGAATTTAAATCGATATTTCATAAGTTACAACTAACACTTATAGAAACAGAA 1084 |||||||||||||| || |||||||||||||||||||||||||||||||||||||| || Sbjct: 296 CAACACTTCGAATTCAATTCGATATTTCATAAGTTACAACTAACACTTATAGAAACCGAT 355 Query: 1083 GTATGAGTACTTATCATTAACGAGGAAAAATGCCCTATTTTGTTTAGCAATTAATGAACC 1024 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 356 GTATGAGTACTTATTATTAACGAGGAAAAATGGCCTATTTTGTTTAGCAATTAATGAACC 415 Query: 1023 ATCGCCAATTTTTGCTTTAACAATTATTGCCATTTTCAGCAGTACTAACGTAAGATCTAG 964 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 416 ATCGCCAATTTTTGCTTTAACAATTATTGCCATTTTCAGTAGTACTAACGTAAGATCTAG 475 Query: 963 TGTGGTTCGCTTAGGATGTTTTTGAGTAGAAATCTGCTGTGCATGCCATACGCAGTACTT 904 |||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||| Sbjct: 476 TGTGGTTCGCTTAGGATGTTTTTGAGTAGAAATCTGCT-TACATGCCACACGCAGTACTT 534 Query: 903 GAAACTTGAAATAATGGTGATAATTAGTTATTTAAAGTATGTTAATCCTCCTTGTTCTTT 844 ||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 535 GAAACTTGAAATAATGGGGATAATTAGTTATTTAAAGTATGTG-------CTTGTTCTTT 587 Query: 843 TATATTTATTTCGAATTCTTTTGCACTAGTATTAAAAATATCAGCAGAGACGTAAAAGTG 784 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 588 TATATTTATTTCGAATTCTTTTGCACTAGTATTTAAAATATCAGCAGAGGCGTAAAAGTG 647 Query: 783 CACCAAAATTATTGTAAAACTACTTGCCCTAAAATTGATACTTCATACTCGACAT--TCA 726 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 648 CACCAAAATTATTGTAAAACTACTTGCCCTAAAATTGATACTTCATACTTGACATATTCA 707 Query: 725 AAAGGGGTCCAAGTTTGGATGCATCNNNNNNNNNNNNGAAATTATCCAATGATGAGCAAA 666 |||||||||||||| | |||||||| ||||||||| |||||||||||| Sbjct: 708 AAAGGGGTCCAAGTATAGATGCATCAAAAAAAAAAA--AAATTATCCGATGATGAGCAAA 765 Query: 665 TGGTAGCTTTTCGTTCCCCAG-AAGTGTAGTAGTTCCATGAAGTCTAATGACACTTTGGA 607 ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 766 TGGTAGCTTTTCGTTCCCCAGGAAGTGTAGTAGTTCCATGAAGTCTAATGAGACTTTGGA 825 Query: 606 AAAAGGTTTGTCACGAGCACCTAACTACTGTATTTTGGAATTTTGATAAACTTCAAAACG 547 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 826 AAAAGGTTTGTCACGAGCACCGAACTACTGTATTTTGGAATTTTGATAAACTTCAAAACG 885 Query: 546 GGAACGAAGTGTTAAACTTAGATGCGGTTGACTTAAGCTTTAAAAGAGGAAAATAATGAC 487 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 886 GGAACGAAGTGTTAAACTTAGATGCGGTTGTTTTAAGCTTTAAAAGAGGAAAATAATGAC 945 Query: 486 TGATGATAAGAATTCAACAACGATTCAAAGCAGGTGAATTTCCATTACGTTTCGCTTTTC 427 || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 946 TGGTGATAAGAAGTCAACAACGATTCAAAGCAGGTGAATTTCCATTACGTTTCGCTTTTC 1005 Query: 426 AATTGAAAAAAATTTGGTGGTTATTCGTTTCTTGCTTGACCTCTTTACTTTTTATACTTC 367 ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 1006 AATTGAAAAAAATTTGGTGGTTATTCGTTTCTTGCTTGACCTCTTCATTTTTTATACTTC 1065 Query: 366 TGTGATGAGAAGCAAGTTCGAGGATTTTACGATAAAGCCTACTGGTTATATTTGTATAAA 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1066 TGTGATGAGAAGCAAGTTCGAGGATTTTACGATAAAGCCTACTGGTTATATTTGTATAAA 1125 Query: 306 TTAGAACGTTGTCCTTATTTCTCTTTTCGAACAGTATCAAAATAAAGTTTTTGATCAGGG 247 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1126 TTAGAACGTTGTCCTTATTTCTCTTTTCGAACAGTATCAAAATAAAGTTTTTGATTAGGG 1185 Query: 246 CCAGATTCTCTTCAAGGAAGAGATACCTCACGTCTGTAATATCTAAGAGCTAATGTTTCG 187 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1186 CTAGATTCTCTTCAAGGAAGAGATACCTCACGTCTGTAATATCTAAGAGCTAATGTTTCG 1245 Query: 186 ATCGAACTTTCCTTTGCTTTTTTTCTGGATCTCATGAGGTCCCACTGTATGTATGTGCCC 127 ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 1246 ATCGAACTTTCCTTTGCTTTTTTTCTGGATCTCATAATGTCCCACTGTATGTATGTGCCC 1305 Query: 126 TCGCACAGTTTTGCTCATCATAAACATTAATCATTGGTTTTATGATAAGAATATCGTAAG 67 |||||||| ||||||||||||| |||||||||||||||| |||||||| ||||||| ||| Sbjct: 1306 TCGCACAGCTTTGCTCATCATAGACATTAATCATTGGTTGTATGATAAAAATATCGCAAG 1365 Query: 66 AATTATTTTAACTTTCAGATTAGATTCCGGCCATATTTCTGACATTTGTTTTATTAATAA 7 ||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1366 AATTATTCTAACGTTCAGATTAGATTCCAGCCATATTTCTGACATTTGTTTTATTAATAA 1425 Query: 6 AAATTT 1 |||||| Sbjct: 1426 AAATTT 1431 Score = 1230 (190.6 bits), Expect = 5.7e-285, Sum P(2) = 5.7e-285 Identities = 254/264 (96%), Positives = 254/264 (96%), Strand = Minus / Plus Query: 1448 ATAAAATTCGCGTTCTTTTTACGTATCTGTGTATCTTTTCTTTGCTAAATATACGCTGAC 1389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ATAAAATTCGCGTTCTTTTTACGTATCTGTGTATCTTTTCTTTGCTAAATATACGCTGAC 60 Query: 1388 ATGAATTATTTTTTAACTGTTTCTCCTCCAAACTTTCAAATATTCAAATTGAACTAAATG 1329 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 61 ATGAATTATTTTTTAACTGTTTCTTCTCCATACTTTCAAATATTCAAATTGAACTAAATG 120 Query: 1328 ATAATTCTTGCGCTTCCTTTTTTGAAAAAGTAGATATATGTATCATAAAGAAAACGTTAT 1269 |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 121 ATAATTCTTGCGCTTCCTATTTTGAAAAAGTAGATATGTGTATCATAAAGAAAACGTTAC 180 Query: 1268 TGTTATTTTCTTGGGCAACAAAAATCCATGAAAAGAATTTCACCGTTATCGATATCATTG 1209 | ||||| |||| ||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 181 TATTATTGTCTTAGGCAACAAAAATCCATGAAAAGAATTTTACCGTTATCGATACCATTG 240 Query: 1208 TATTTATTTTATTTATTTATTTAA 1185 |||||||||||||||||||||||| Sbjct: 241 TATTTATTTTATTTATTTATTTAA 264 >NOT:A_22687-24001 Chromosome 1 from 22687 to 24001 Length = 1315 Plus Strand HSPs: Score = 6323 (954.8 bits), Expect = 2.4e-282, P = 2.4e-282 Identities = 1279/1315 (97%), Positives = 1279/1315 (97%), Strand = Plus / Plus Query: 134 TACATACAGTGGGACCTCATGAGATCCAGAAAAAAAGCAAAGGAAAGTTCGATCGAAACA 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 TACATACAGTGGGACCTCATGAGATCCAGAAAAAAAGCAAAGGAAAGTTCGATCGAAACA 60 Query: 194 TTAGCTCTTAGATATTACAGACGTGAGGTATCTCTTCCTTGAAGAGAATCTGGCCCTGAT 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 TTAGCTCTTAGATATTACAGACGTGAGGTATCTCTTCCTTGAAGAGAATCTGGCCCTGAT 120 Query: 254 CAAAAACTTTATTTTGATACTGTTCGAAAAGAGAAATAAGGACAACGTTCTAATTTATAC 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 CAAAAACTTTATTTTGATACTGTTCGAAAAGAGAAATAAGGACAACGTTCTAATTTATAC 180 Query: 314 AAATATAACCAGTAGGCTTTATCGTAAAATCCTCGAACTTGCTTCTCATCACAGAAGTAT 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 AAATATAACCAGTAGGCTTTATCGTAAAATCCTCGAACTTGCTTCTCATCACAGAAGTAT 240 Query: 374 AAAAAGTAAAGAGGTCAAGCAAGAAACGAATAACCACCAAATTTTTTTCAATTGAAAAGC 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 AAAAAGTAAAGAGGTCAAGCAAGAAACGAATAACCACCAAATTTTTTTCAATTGAAAAGC 300 Query: 434 GAAACGTAATGGAAATTCACCTGCTTTGAATCGTTGTTGAATTCTTATCATCAGTCATTA 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 GAAACGTAATGGAAATTCACCTGCTTTGAATCGTTGTTGAATTCTTATCATCAGTCATTA 360 Query: 494 TTTTCCTCTTTTAAAGCTTAAGTCAACCGCATCTAAGTTTAACACTTCGTTCCCGTTTTG 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 TTTTCCTCTTTTAAAGCTTAAGTCAACCGCATCTAAGTTTAACACTTCGTTCCCGTTTTG 420 Query: 554 AAGTTTATCAAAATTCCAAAATACAGTAGTTAGGTGCTCGTGACAAACCTTTTTCCAAAG 613 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 AAGTTTATCAAAATTCCAAAATACAGTAGTTAGGTGCTCGTGACAAACCTTTTTCCAAAG 480 Query: 614 TGTCATTAGACTTCATGGAACTACTACACTTCTGGGGAACGAAAAGCTACCATTTGCTCA 673 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 TGTCATTAGACTTCATGGAACTACTACACTTCTGGGGAACGAAAAGCTACCATTTGCTCA 540 Query: 674 TCATTGGATAATTTCNNNNNNNNNNNNGATGCATCCAAACTTGGACCCCTTTTGAATGTC 733 ||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 541 TCATTGGATAATTTCTTTTTTTTTTTTGATGCATCCAAACTTGGACCCCTTTTGAATGTC 600 Query: 734 GAGTATGAAGTATCAATTTTAGGGCAAGTAGTTTTACAATAATTTTGGTGCACTTTTACG 793 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 GAGTATGAAGTATCAATTTTAGGGCAAGTAGTTTTACAATAATTTTGGTGCACTTTTACG 660 Query: 794 TCTCTGCTGATATTTTTAATACTAGTGCAAAAGAATTCGAAATAAATATAAAAGAACAAG 853 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 661 TCTCTGCTGATATTTTTAATACTAGTGCAAAAGAATTCGAAATAAATATAAAAGAACAAG 720 Query: 854 GAGGATTAACATACTTTAAATAACTAATTATCACCATTATTTCAAGTTTCAAGTACTGCG 913 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 721 GAGGATTAACATACTTTAAATAACTAATTATCACCATTATTTCAAGTTTCAAGTACTGCG 780 Query: 914 TATGGCATGCACAGCAGATTTCTACTCAAAAACATCCTAAGCGAACCACACTAGATCTTA 973 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 781 TATGGCATGCACAGCAGATTTCTACTCAAAAACATCCTAAGCGAACCACACTAGATCTTA 840 Query: 974 CGTTAGTACTGCTGAAAATGGCAATAATTGTTAAAGCAAAAATTGGCGATGGTTCATTAA 1033 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 CGTTAGTACTGCTGAAAATGGCAATAATTGTTAAAGCAAAAATTGGCGATGGTTCATTAA 900 Query: 1034 TTGCTAAACAAAATAGGGCATTTTTCCTCGTTAATGATAAGTACTCATACTTCTGTTTCT 1093 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 901 TTGCTAAACAAAATAGGGCATTTTTCCTCGTTAATGATAAGTACTCATACTTCTGTTTCT 960 Query: 1094 ATAAGTGTTAGTTGTAACTTATGAAATATCGATTTAAATTCGAAGTGTTGTTTGCAGGAT 1153 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 961 ATAAGTGTTAGTTGTAACTTATGAAATATCGATTTAAATTCGAAGTGTTGTTTGCAGGAT 1020 Query: 1154 ATAAATCNNNNNNNNNNNNNNNNNNNNNNNNTTAAATAAATAAATAAAATAAATACAATG 1213 ||||||| ||||||||||||||||||||||||||||| Sbjct: 1021 ATAAATCAAAAAAAAAAAAAAAAAAAAAAAATTAAATAAATAAATAAAATAAATACAATG 1080 Query: 1214 ATATCGATAACGGTGAAATTCTTTTCATGGATTTTTGTTGCCCAAGAAAATAACAATAAC 1273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 ATATCGATAACGGTGAAATTCTTTTCATGGATTTTTGTTGCCCAAGAAAATAACAATAAC 1140 Query: 1274 GTTTTCTTTATGATACATATATCTACTTTTTCAAAAAAGGAAGCGCAAGAATTATCATTT 1333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 GTTTTCTTTATGATACATATATCTACTTTTTCAAAAAAGGAAGCGCAAGAATTATCATTT 1200 Query: 1334 AGTTCAATTTGAATATTTGAAAGTTTGGAGGAGAAACAGTTAAAAAATAATTCATGTCAG 1393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1201 AGTTCAATTTGAATATTTGAAAGTTTGGAGGAGAAACAGTTAAAAAATAATTCATGTCAG 1260 Query: 1394 CGTATATTTAGCAAAGAAAAGATACACAGATACGTAAAAAGAACGCGAATTTTAT 1448 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1261 CGTATATTTAGCAAAGAAAAGATACACAGATACGTAAAAAGAACGCGAATTTTAT 1315 >NOT:A_208654-209439 Chromosome 1 from 208654 to 209439 Length = 786 Minus Strand HSPs: Score = 3587 (544.2 bits), Expect = 1.5e-158, P = 1.5e-158 Identities = 753/791 (95%), Positives = 753/791 (95%), Strand = Minus / Plus Query: 789 AAAGTGCACCAAAATTATTGTAAAACTACTTGCCCTAAAATTGATACTTCATACTCGACA 730 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1 AAAGTGCACCAAAATTATTGTAAAACTACTTGCCCTAAAATTGATACTTCATACTTGACA 60 Query: 729 T--TCAAAAGGGGTCCAAGTTTGGATGCATCNNNNNNNNNNNNGAAATTATCCAATGATG 672 | ||||||||||||||||| | |||||||| ||||||||| |||||| Sbjct: 61 TATTCAAAAGGGGTCCAAGTATAGATGCATCAAAAAAAA-----AAATTATCCGATGATG 115 Query: 671 AGCAAATGGTAGCTTTTCGTTCCCCAGAAGTGTAGTAGTTCCATGAAGTCTAATGACACT 612 |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct: 116 AGCAAATGGTAGCTTTTCGTTCCCAGGAAGTGTAGTAGTTCCATGAAGTCTAATGAGACT 175 Query: 611 TTGGAAAAAGGTTTGTCACGAGCACCTAACTACTGTATTTTGGAATTTTGATAAACTTCA 552 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 176 TTGGAAAAAGGTTTGTCACGAGCACCTAACTATTGTATTTTGGAATTTTGATAAACTTCA 235 Query: 551 AAACGGGAACGAAGTGTTAAACTTAGATGCGGTTGACTTAAGCTTTAAAAGAGGAAAATA 492 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 236 AAACGGGAACGAAGTGTTAAACTTAGATGCGGTTGATTTAAGCTTTAAAAGAGGAAAATA 295 Query: 491 ATGACTGATGATAAGAATTCAACAACGATTCAAAGCAGGTGAATTTCCATTACGTTTCGC 432 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 296 ATGACTGATGATAAGAAGTCAACAACGATTCAAAGCAGGTGAATTTCCATTACGTTTCGC 355 Query: 431 TTTTCAATTGAAAAAAATTTGGTGGTTATTCGTTTCTTGCTTGACCTCTTTACTTTTTAT 372 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 356 TTTTCAATTGAAAAAAATTTGGTGGTTATTCATTTCTTGCTTGACCTCTTTACTTTTTAT 415 Query: 371 ACTTCTGTGATGAGAAGCAAGTTCGAGGATTTTACGATAAAGCCTACTGGTTATATTTGT 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 ACTTCTGTGATGAGAAGCAAGTTCGAGGATTTTACGATAAAGCCTACTGGTTATATTTGT 475 Query: 311 ATAAATTAGAACGTTGTCCTTATTTCTCTTTTCGAACAGTATCAAAATAAAGTTTTTGAT 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 476 ATAAATTAGAACGTTGTCCTTATTTCTCTTTTCGAACAGTATCAAAATAAAGTTTTTGAT 535 Query: 251 CAGGGCCAGATTCTCTTCAAGGAAGAGATACCTCACGTCTGTAATATCTAAGAGCTAATG 192 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 536 TAGGGCCAGATTCTCTTCAAGGAAGAGATACCTCACGTCTGTAATATCTAAGAGCTAATG 595 Query: 191 TTTCGATCGAACTTTCCTTTGCTTTTTTTCTGGATCTCATGAGGTCCCACTGTATGTATG 132 |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 596 TTTCGATCGAACTTTCCTTTGCTTTTTTTCTGGATCTCATAATGTCCCACTGTATGTATG 655 Query: 131 TGCCCTCGCACAGTTTTGCTCATCATAAACATTAATCATTGGTTTTATGATAAGAATATC 72 ||||||||||||| ||||||||||||| |||||||||||||||| || ||||| |||||| Sbjct: 656 TGCCCTCGCACAGCTTTGCTCATCATAGACATTAATCATTGGTTGTACGATAAAAATATC 715 Query: 71 GTAAGAATTATTTTAACTTTCAGATTAGATTCCGGCCATATTTCTGACATTTGTTTTATT 12 | || ||||||| |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 GCAAAAATTATTCTAACGTTCAGATTAGATTCCGGCCATATTTCTGACATTTGTTTTATT 775 Query: 11 AATAAAAATTT 1 ||||||||||| Sbjct: 776 AATAAAAATTT 786 >NOT:A_208007-208358 Chromosome 1 from 208007 to 208358 Length = 352 Minus Strand HSPs: Score = 1215 (188.3 bits), Expect = 4.5e-51, P = 4.5e-51 Identities = 253/264 (95%), Positives = 253/264 (95%), Strand = Minus / Plus Query: 1448 ATAAAATTCGCGTTCTTTTTACGTATCTGTGTATCTTTTCTTTGCTAAATATACGCTGAC 1389 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1 ATAAAATTCGCGTTCTTTTTACGTATCTGTGTATCTTTTCTTTGCTAATTATACGCTGAC 60 Query: 1388 ATGAATTATTTTTTAACTGTTTCTCCTCCAAACTTTCAAATATTCAAATTGAACTAAATG 1329 |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 61 ATGAATTATTTTTTAACTGTTTCTCCTCCATACTTTCAAATATTCAAATTGA-CTAAATG 119 Query: 1328 ATAATTCTTGCGCTTCCTTTTTTGAAAAAGTAGATATATGTATCATAAAGAAAACGTTAT 1269 |||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||| Sbjct: 120 ATAATTCTTGCGCTTCTTATTTTGAAAAAGTAGATATGTGTATCATAAAGAAAACGTTAT 179 Query: 1268 TGTTATTTTCTTGGGCAACAAAAATCCATGAAAAGAATTTCACCGTTATCGATATCATTG 1209 | ||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 180 TATTATTGTCTTAGGCAACAAAAATCCATGAAAAGAATTTTACCGTTATCGATATCATTG 239 Query: 1208 TATTTATTTTATTTATTTATTTAA 1185 ||||||||||||||||||||| || Sbjct: 240 TATTTATTTTATTTATTTATTCAA 263 Score = 368 (61.3 bits), Expect = 9.6e-12, P = 9.6e-12 Identities = 170/278 (61%), Positives = 170/278 (61%), Strand = Minus / Plus Query: 1356 CTTTCAAATATTCAAATTGAACTAAATGA-TAATTCTTGCG-CTTCCTTTTTTGAAAAAG 1299 | | || | ||||||| | || ||| ||| | | ||| | || | | | Sbjct: 85 CCTCCATACTTTCAAATATT-CAAATTGACTAAATGATAATTCTTGCGCTTCTTATTTTG 143 Query: 1298 TAGATATATGTATCATAAAGAAAACGTTATTGTTATT-TTCTTGGGCAA--CAAAAATCC 1242 | | || ||| | | || | | |||||| || ||| | ||| || Sbjct: 144 AAAAAGTAGATATGTGTATCATAAAGAAAACGTTATTATTATTGTCTTAGGCAACAAAA- 202 Query: 1241 ATGAAAAGAATTTCACCGTTATCGATATCATTGTATTTATTTTATTTATTT-ATTTAANN 1183 || | ||| | ||| || |||| | || ||| ||||||||| ||||| Sbjct: 203 ATCCAT-GAAAAGAATT-TTACCGTTATCGAT--ATC-ATTGTATTTATTTTATTTA--T 255 Query: 1182 NNNNNNNNNNNNNNNNNNNNNNGATTTATATCCTGCAAACAACACTTCGAATTTAAATCG 1123 | ||||||||||||||||||||||||||||| || ||| Sbjct: 256 TTATTCAATTTTTTTTTTTTTGG-TTTATATCCTGCAAACAACACTTCGAATTCAATTCG 314 Query: 1122 ATATTTCATAAGTTACAACTAACACTTATAGAAACAGA 1085 ||||||||||||||||||||||||||||||||||| || Sbjct: 315 ATATTTCATAAGTTACAACTAACACTTATAGAAACCGA 352 >NOT:Q_802-3952 Chromosome Mito from 802 to 3952 Length = 3151 Minus Strand HSPs: Score = 294 (50.2 bits), Expect = 7.2e-06, P = 7.2e-06 Identities = 298/540 (55%), Positives = 298/540 (55%), Strand = Minus / Plus Query: 1300 AGTAGATATATGTATCATAAAGAAAACGTTATTGTTATTTTCTTGGGCAACAAAA-ATCC 1242 | || ||| | ||| ||| | || ||||| |||| | || | ||| || Sbjct: 2329 ATTAATTATTTATAT-ATATATTTAATATTATTTTTATATAATTTTATATTAAAGTATT- 2386 Query: 1241 ATGAAAAGA-ATTTCACCGT-TATCGATATCATTGTAT-TTATTTTATTTATTTATTTAA 1185 || | | | |||| | | | | |||| ||| ||| |||||| ||||||||||||| Sbjct: 2387 ATAATTATATATTTAATATTATTTTTATATAATTTTATATTATTT-ATTTATTTATTTAT 2445 Query: 1184 NNNNNNNNNNNNNNNNNNNNNNNNGATTTA-TATCCTGCAAACAACACTTCGAAT-TTAA 1127 ||||| ||| | || | | || || ||| Sbjct: 2446 TTATTTAAAAATATTATAATCATATATTTAATATTATTTAAT--ATATTTTATATATTAT 2503 Query: 1126 ATCGATATTTCATAAGTTACAACTA-ACACTTA-TAGAAACAGAAGTATGAGTACTTATC 1069 ||| | || || | | | || | | ||| || | | | | ||| || ||| Sbjct: 2504 ATCTTTTATTGATTTAT-ATATATATAGATTTAATAAATATATATATATATATATATATA 2562 Query: 1068 ATTAACGAGGAAAAATGCCCTATTTTGTTTAGCAATTAATGAACCATCGCCAATTTTTGC 1009 | || | | | || |||| | ||| | ||| | || || ||| | Sbjct: 2563 AATATTCATTATATATTTATTATTATTATTATTATTTATT--ACTATTTTTTATTATATA 2620 Query: 1008 TTTAACAAT-TAT-TGCCATTT-TCAGCAGTA--CTAAC-GTAAGATCTAGTGTGGTTCG 955 || || ||| ||| | ||| | | ||| |||| ||| || || | | || Sbjct: 2621 TT-AATAATATATATATTATTAGTTATGGGTATCCTAATAGTAT-AT-TATTATTTTTAA 2677 Query: 954 CT-TAGG--ATGTTTT-TGAGTAG-AAATCTGCTGTGCATGCCATACGCAGTACTTGAAA 900 || ||| ||| || || |||| | | | || | |||| | || | |||| Sbjct: 2678 TAATAATTTATGATTTATGTATAATAAATAAGTAGGGAAT-CGGTACGAA-TA-TCGAAA 2734 Query: 899 CTTGAAATAATGGTGATAATTAGTTATTTA-AAGTATGTTA-ATCCTCCTTGTTCTTTTA 842 || || | | || |||| ||||||| || ||| ||| || | | || ||| | Sbjct: 2735 G--GAGTTA-TA-T-ATTATTAATTATTTATAATTATTTTATATATTATTAATTATTT-A 2788 Query: 841 TATTTATTTCGAATTCTTTTGCACTAGTATTAAAAATATCAGC-AGAGACG-TAAA-AGT 785 || |||||| || || | | || | ||| | | || | ||| | | || | ||| Sbjct: 2789 TAATTATTTTATATATTTATA-ATTATT-TTATATAGATAGGTTAGATAGGATAGATAGT 2846 >NOT:Q_66285-67061 Chromosome Mito from 66285 to 67061 Length = 777 Plus Strand HSPs: Score = 286 (49.0 bits), Expect = 7.3e-06, P = 7.3e-06 Identities = 254/464 (54%), Positives = 254/464 (54%), Strand = Plus / Plus Query: 1000 ATTGTTAAAGCAAAAATTGGCGATGGTTCATTAATTGCTAAACAAAATAGGGCATTTTTC 1059 ||| | || || ||| ||| | | |||| | || | || | || || Sbjct: 55 ATTAATTAATTAATAATATATGATAATATAAAAATTATTGAATTAT-TAACTC-TTATTA 112 Query: 1060 CTCGTTAATGATAAGTACTCATACTTCTGT-T-TCTATA-AGTGT-TAGTTGTAACTTAT 1115 | | ||| |||| | | ||| | | | | | |||| ||| | || | || || | Sbjct: 113 ATAAT-AATAATAATCA-TAATAATAATATATATATATATAGTATATATATAAAAGTTTT 170 Query: 1116 GAAATATCGAT-TTAAATTCGAAGTGTTGTTTGCAGGATATAAATCNNNNNNNNNNNNNN 1174 |||| || ||| ||| | | || ||| | |||||| || Sbjct: 171 ATTATATT-ATATTATATTATATAT-TTATTT--AT-ATATAATTCTTATTAATTGAAAA 225 Query: 1175 NNNNNNNNNNT-TAAA-TAAATAAATAAAATAAATACAATGATATCGATAACGGTGAAAT 1232 ||| | | |||| ||||||||||| | || | || | | | Sbjct: 226 AAGAATAATTAATAATCTTATTAAA-AAAATAAATACTTTCATTTT-ATTTTATTTTATT 283 Query: 1233 TCTTTTCATGGATTTTTGTTGCCCAAGAAAATAACAATA-ACGTTTTCTTTATGATACA- 1290 | ||| || || | | | |||| || ||| | ||||| | || |||| | Sbjct: 284 TAATTTAATT-ATAATATATAAATATTAAAAAAAGGATATAAGTTTTTTATAAGATATAA 342 Query: 1291 TATATCTACTTTTTCAAAA-AAGGAAGCGCAAGAATTATCATTTAGTTC-AATTTGAATA 1348 ||||| || | || || | || |||| || | |||| |||| || || || || Sbjct: 343 TATATATATATATTAAATATAAAGAAGTT-AATATTTATATTTTAATTATAAAATGT-TA 400 Query: 1349 TTTGAAAGTTTGGAGGAGAAAC-AGTTAAAAAAT-AATTCATGTCAGCGTAT-ATTTAGC 1405 | ||||| ||| | | ||||| || |||| || | ||| ||||| Sbjct: 401 ATACTCC-TTTGG-GGACTTATTAATTAAATTATTAATTAATAATAATTTATGATTTAT- 457 Query: 1406 AAAGAAAAGATACACAGATACGTAAAAAGAACGCGA-ATTTTAT 1448 ||| || | ||| | ||| ||| || | | || |||| Sbjct: 458 AAATAATAAATAAAGGAATAAGTATCAATTAATTAATATATTAT 501 >NOT:Q_75984-77431 Chromosome Mito from 75984 to 77431 Length = 1448 Plus Strand HSPs: Score = 253 (44.0 bits), Expect = 0.00046, P = 0.00046 Identities = 365/695 (52%), Positives = 365/695 (52%), Strand = Plus / Plus Query: 759 AAGTAGTTTTACAAT-AATTTTGGTGCACTTTTACGT-CTCTGCTGATATTTT-TAATAC 815 || || | || ||| || || | | || || | ||| | ||| ||| || | Sbjct: 676 AATTA-TAATATAATTAAATTATAAGAA-TTATATTTACTCCTTTTATAATTTATATTTA 733 Query: 816 TAGTGCAAAAGAATTCGAAATAAATATAAAAGAACAAGGAGGATTAACATACTTTAAATA 875 || | || | ||| |||||||||||| | || | | || || ||| | ||| || Sbjct: 734 TAATATAATATAATATAAAATAAATATAATATAATATAAA--ATAAATATAATGTAA-TA 790 Query: 876 ACTAATTA-TCACCATTAT--TTCAAGTTTCAAGTACTGCGTATGGC-ATGCACA-GCAG 930 || | | || | || ||| | | ||| | || || | | | | | | Sbjct: 791 GGTATTCACTCCTCTTTGGGGTTCCGATCCCCCATACGGA-TACGGATACGGATACGAAT 849 Query: 931 ATTTCTACTCAAAAACATCCTAAGCGAACCACACTAGATCTTACG-TTAGTACTGCTGAA 989 | ||| | | || | | | | | ||| |||| ||| || | | || Sbjct: 850 ACGGATACGGATACGGATACGGGGGGCCGTCCCCCAGAACTTAATATTA-TA-TCTTAAA 907 Query: 990 -AATGGCAATAATTGTTAAAGCAAAAATTGGCGATGGTTCATTAATTGCTAAACAAAATA 1048 ||| |||| | | | | | | || || | || ||| |||| ||| | Sbjct: 908 TAATTAATATAAATATAATAT-ATTATTTAATAATAATA-ATAAATAAATAAATAAATAA 965 Query: 1049 GGGCATTT-TTCC-TCGTTAATGATAAGTACTCATACTT-CTGTTTCTATAAGTGTTAGT 1105 || || | |||| ||| || | ||| || || ||| |||| | || | Sbjct: 966 ATAAATAAATTAAATAAATAATAATAT-TATT-ATAATTACTTTTTA-ATAAATAATATT 1022 Query: 1106 TGTAACTTATGAAATATCG-ATT-TAAATTCGAAGTGTTGTTTGCAGGATATA-AATCNN 1162 || ||| | || | | ||| ||||| || | || || ||||| ||| Sbjct: 1023 AATATAATATTATAT-TAGTATTATAAATA-GACTTTTTATTATTTT-ATATATAATATA 1079 Query: 1163 NNNNNNNNNNNNNNNNNNNNNNTTAAATA-AATAAATAAAATAA-ATACAATGAT-ATCG 1219 | || | ||| ||| ||| ||| || || Sbjct: 1080 GTCCGGCCCGCCCCCGCGGGGCGGACCCCGAAGGAGTAATATATTATATAATTATTATTT 1139 Query: 1220 ATAACGGTGAAATTCTTT-TCATGGATT-TTTGTTGCCCAAGAAA-ATAACAATAACGTT 1276 ||| | |||| | | || ||| ||| || || | |||| ||| | Sbjct: 1140 TTAATTAT-AAATAAAATATAATT-ATTATTTATTATATAATTTATATAAATATATATAT 1197 Query: 1277 TTCTTTATGATACATATATCTACTTTTTCAAAAA-AGGAAGCGCAAGAATTATCATTTAG 1335 | ||||| ||| ||||| || | ||| | | || | |||| ||| Sbjct: 1198 ATATTTATTATATATATAAATATAAATATAAATATAATAATTAATAATATTAAAGTTTTA 1257 Query: 1336 TTCAATTTGA-ATATT-TGAAAGTTTGGAGGAGAAACAGTTAAAAA-ATAATTCATGTCA 1392 | | || | ||||| | |||| || | | | | | ||| || |||| | || Sbjct: 1258 TATATATTAATATATTATAAAAGGTTT-AT-ATATATATATAATAAGATAAGTAATAAAT 1315 Query: 1393 GCGTATATTTAGCAA-AGAAAAGATACACAG-ATA 1425 | || ||| || | |||| ||| | | ||| Sbjct: 1316 TAAT-TAATTAATAATATAAAA-ATATATATTATA 1348 Score = 177 (32.6 bits), Expect = 1.6, P = 0.80 Identities = 289/552 (52%), Positives = 289/552 (52%), Strand = Plus / Plus Query: 722 CTTTTGAATGTCGAGTATGAAGTATCAATTTTAGGGCAAGTAGTTTTACAATAATTTTGG 781 ||||| | | | | ||| | || | |||| || || ||||| ||| | || Sbjct: 76 CTTTT-ATTATAAA-TATATAAAATTA-TTTTCTTTTAATTATTTTTATAATTAATTAAT 132 Query: 782 TGCACTTTTACGTCTCT-GCTGATAT-TTTTAATACTAGTGCAAAAGAATTCGAAATAA- 838 | ||| | | || | || ||| |||||||| || | | || || | Sbjct: 133 T---CTTC-ATGGCTATAGCC-ATAACTTTTAATAATATTCTTTTATTCTTTATTATTAT 187 Query: 839 ATATAAA-AGAACAAGGAGG-ATTAACATAC--TTTAAATAACTAATTATCACCATTATT 894 ||||| | | | | | |||| ||| |||| || ||| || | | |||| Sbjct: 188 ATATATATATATTTATTATTTATTATTATAGAATTTATATTTATAAAAAT-ATTAATATT 246 Query: 895 TCAAGTTTCAAGTACTGCGT-ATGGCATGCACAGCAGATTTCT-ACTCAAAAA-CA--TC 949 | | ||| || || | || || | | | || | | | | || | || Sbjct: 247 TTA--TTTAAAATAAATAATGATTA-ATTTATAAAATATATATTAATTAAGTTTCGGGTC 303 Query: 950 CTAAGCGAACC-ACACTAGATCTTACGTTAGTACTGCTGAAAATGGCAAT-AATTGTTAA 1007 | || | || | || | || || | | | | | | ||| || | || | Sbjct: 304 CCG-GCTACGGGACCCG-GAACCCCCGAGAGGAGTTATTATATTTATAATTAAATCTTTA 361 Query: 1008 AGCAAAAATTGGCGATGGTTCATTA-ATTGCTA--AACAAAATAGGGCATTTTTCCTCGT 1064 | || | | | || |||| |||| || || | ||| | || || | | Sbjct: 362 AATAATATATCTTAAA--TT-ATTATATTGATATTAATATTATATTG-ATATTAA-TATT 416 Query: 1065 TAATG-ATAAGTACTCAT-A-CTTCTGTTTCTATAAGTGT-TAGTTGTAACTTATGAAAT 1120 ||| ||| || | | | ||| | || ||||| | || || || |||| | || Sbjct: 417 AAATATATATTTAATATTTAGCTTATTATTTTATAAAATTATATTTATATATTATAATAT 476 Query: 1121 ATCGATTTAAATTCGAAGTGTTGTTTGCAGGATATAAATCNNNNNNNNNNNNNNNNNNNN 1180 | | || ||| || | || | ||| |||| Sbjct: 477 AATTAAATATATTATAAAT-TTAATAATTTAATAAAAATATTCTTTTTATAATTATTATA 535 Query: 1181 NNNNTTAAATAAATAAATAA-AATAAATACAATGATATCGATAACGGTGAAATTCTTTTC 1239 |||||||||||| ||| ||||| | ||| | || |||| | || | | Sbjct: 536 ATAATTAAATAAATAA-TAATAATAAGAATAATTA-ATGTATAATTTTTTTATAAATATT 593 Query: 1240 ATGGATTTTTGT 1251 || |||||| | Sbjct: 594 ATATATTTTTAT 605 >NOT:Q_51429-54109 Chromosome Mito from 51429 to 54109 Length = 2681 Minus Strand HSPs: Score = 233 (41.0 bits), Expect = 0.0047, P = 0.0047 Identities = 367/694 (52%), Positives = 367/694 (52%), Strand = Minus / Plus Query: 1403 TAA-ATATACGCTGACATGAATTATTTTTTAACTGTT-TCTCCTCCAAACTTTCAAATAT 1346 ||| ||||| || || || ||| | |||| | | | | | ||| | |||||| Sbjct: 84 TAATATATATCCTTT-ATTAAATATATATTAATTAATATATA-TATAAAAAGT-AAATAT 140 Query: 1345 TCA-AATTGAACTA-AATGATAATTCTTGCGCTTCCTTTTTTGAAAAAGTAGATATATGT 1288 | ||||| | || ||| |||| | | | ||| || ||| | || ||| || | Sbjct: 141 TATTAATTGTA-TATAATTATAAATAATTAA--TA-TTTATTAAAATA-TATATA-ATTT 194 Query: 1287 ATCATAAAGAAAACGTTATTGTTATTT-TCTTGGGCAACAAAAATCCATGAAAAGAATTT 1229 || || | | ||| | | || | | |||| | | || |||| Sbjct: 195 ATAATCCTCATATAATTAATATAATAAATAATATAACACAATG-TAATTTAATTTAATTA 253 Query: 1228 CACCGTTA-TCGAT-ATCATTGTATTTATT--TTATTTATTTATTTAANNNNNNNNNNNN 1173 || | | | || || ||| || ||||| ||||||||||||||| Sbjct: 254 CATAATAAATTTATTATTATTATAATTATTATTTATTTATTTATTTATTATTATAAATTA 313 Query: 1172 NNNNNNNNNNNNGATTTATATCCTGCAAACAACACTTCG-AATT-TAAATCGATATTTCA 1115 | ||| | | ||| | | || ||| ||||| || | | Sbjct: 314 TAAATATTATTATAATTAAAA--T-CAATTATTAATTATTAATGATAAATAATTAATG-A 369 Query: 1114 TAAGTTA-CAACTAACACTTATAGAA-ACAGAAGTATGAGTACTTATCATTA-ACGAGGA 1058 ||| ||| ||| |||| | |||| | | || || |||| |||| | | Sbjct: 370 TAAATTATCAA-TAACCAAT-TAGATTATTTATCGATATTTAATTAT-ATTATATTATAT 426 Query: 1057 AAAATGCCCTATTT-TGT-T-TAGCA-ATTAATGAACC-ATCGCCAATT-TTTGCTTTAA 1004 | || ||| | | | | || | |||| || || || | |||| |||| Sbjct: 427 TATATTATATATATATATATATATTATATTATAAAATTTATTTATAAATATTTG-TTTAT 485 Query: 1003 CAATTATTGCCATTTTCAGCAGTACTAACGTAAGATCTAGTGTGGTTCGCTTAGGA-TGT 945 ||||| |||| | | || | | | | || ||| | | | | | Sbjct: 486 ---TTATTT--ATTTATTGAATAACAATAGAATTAAATATTGTCAATAAATAATAAATAA 540 Query: 944 TTTTGAGTAGAAATCTGCTGTGCATGCC-ATACGCAGTACT-TGAAACTTGAAATAATGG 887 | || | || | || | | || || | || | | | || || || Sbjct: 541 TGTTTAATATATATTATAT-TATATTAATATTAATATTATTATTATTTTTTTTATTATAT 599 Query: 886 TGATAATTAGTTATTTAAAGTATGTTAATCCTCCTTGTTCTTTTATATTTATTTCGAATT 827 | ||| | | |||| ||| ||| ||| | || || || || |||||| | | | Sbjct: 600 TAATA-TAATTTATAAAAA-TATAA-AATTATTATTTTTATTATA-ATTTATATATATAT 655 Query: 826 CTTTTGCACTAGTATTAAAA-ATATCAGCAGAGACGTAAAAG--TGCACCAAAATTATTG 770 | | | |||||||| || | | | || | |||| | | |||||| Sbjct: 656 AATATATATATTTATTAAAATATTTTAAGAAAGGAGAAAAATAATTAAATTAAATTAAAT 715 Query: 769 TAAAACTACTTGCCCTAAA-ATTGATACTTCATA 737 |||| || || | | ||| || || ||| Sbjct: 716 TAAAT-TATTTATTATTATTATTATTATTT-ATA 747 >NOT:Q_46953-48201 Chromosome Mito from 46953 to 48201 Length = 1249 Plus Strand HSPs: Score = 228 (40.3 bits), Expect = 0.0064, P = 0.0063 Identities = 162/276 (58%), Positives = 162/276 (58%), Strand = Plus / Plus Query: 1185 TTAAATAAATAAATAAAATAAA-TACAATGATATCG-ATAACGGTGAAATTCTTTTCATG 1242 | |||| |||||| |||||||| || ||| | ||| || | | ||||| | ||| Sbjct: 36 TGAAATTAATAAA-AAAATAAAATAAAATAAAATCTCATTT-GATTAAATTAATAACATT 93 Query: 1243 GATTTTTGTTGCCCAAGAAA-ATAACA-ATA-ACGTTTTCTT-TA-TGATACATATATCT 1297 || | || || | |||| | ||| | | || | || | ||| |||||| | Sbjct: 94 C-TTATAATTATATAATTATTATAAAATATATAAATATTATAATAATAATA-ATATATAT 151 Query: 1298 ACTTTTTCAAAAAAGGAAGCGCAAGAAT-TATCATTTAGTTCAATTTGAATATTTGAAAG 1356 | || | | |||| || || ||| ||| || || | ||| ||||| | || Sbjct: 152 AAATTATAATAAAA--AATAATAATAATATATAATATACCTTTTTTTTAATATATTAATA 209 Query: 1357 TTTGGAGGAG-AAACAGTTAA-AA-A-ATAATTCATGTCAGCGTATATTTAGCAAAGAAA 1412 | | | | ||| | | | || | |||||| | | ||| ||| || | | Sbjct: 210 TATAAATAAATAAATAATGGATAATATATAATTACTTTTTTTATATTATTAATAATAATA 269 Query: 1413 AGATACACAGATACGTAAAAAGAACGCGAATTTTAT 1448 | || | | || || | || || | | || ||| Sbjct: 270 ATTTATAAATATT-GTTATAATAAA-C-ATTTATAT 302 >NOT:Q_54438-58009 Chromosome Mito from 54438 to 58009 Length = 3572 Plus Strand HSPs: Score = 213 (38.0 bits), Expect = 0.041, P = 0.040 Identities = 273/513 (53%), Positives = 273/513 (53%), Strand = Plus / Plus Query: 718 ACCCCTTTTGA-ATGTCGAGTATG-AAGTATCAATTTTAGGGCAAGTAGTT-TTACAATA 774 || |||||||| | | | | | || ||| ||| | | || || | ||| | | Sbjct: 2880 ACTCCTTTTGAGACTTTAATTTTATAAATATAAATATAAATATAATAAGATGTTA-ACTC 2938 Query: 775 ATTT-TGGTGCACTTTTACGTCTCTGCTGATATTTTTAATACTAGTGCAAAAGAATTCGA 833 ||| | | | || | | | ||||||||||| || | | || | || | Sbjct: 2939 TTTTATAAATAAATAATAAATATAAT-TC-TATTTTTAATAATAATATATAATATTTTTA 2996 Query: 834 -AATAAATATAAAAGAACAAGGAGGATTAACATACTTTAAATA-ACTAATTATCACCATT 891 |||||| ||| | || || | ||| | ||| | || ||| ||| || | | || Sbjct: 2997 TAATAAA-ATATATAAATAATAAT-ATTTATATA-TATATATATACTTTTTTTTAT-ATA 3052 Query: 892 ATTTCAAGTTTCAAGTACTGCGTATGGCATGCACAGCAGATTTCTACTCAAAAACATCCT 951 | || | | | || | | || | | || || | | | | | ||| || | Sbjct: 3053 AGAATAA-TATATA-TAGTTCACATTGGAGGCG-AGTAAAAGGAGA-TAAGAAATATAAT 3108 Query: 952 A--AGCGAACCACACTAGATCTTACGT-TAGTACTGCTGAAAATGGCAATAATTGTTAAA 1008 | | || | | | || | | | || || | | ||||| ||||| ||| Sbjct: 3109 ATAATATAATAATAAAA-ATATAATGAATAATAATAATAAAAATTTATATAATAACAAAA 3167 Query: 1009 --G-CAAAAATT-GGCGATG-GTTCATTAAT--TGCTAAACAAAATAGGGCATTTTTCCT 1061 | | | || |||| | | |||||| | |||| || | | | ||| | | Sbjct: 3168 TAGTCCGACCGAAGGAGATGAGATTATTAATATTATTAAATAATAAAATGTATTAATTAT 3227 Query: 1062 CGTTAATGATAAGTACTCATACTTCTGTTTCTATAAGTGTTAGT-TG-TAACTTATGAAA 1119 || | | || ||| || | | ||||| | || | || ||| | || | | Sbjct: 3228 AAAATATAAAACCTATAAATAATT-TATAA-TATAATTTATATTATGATAA-TAATAATA 3284 Query: 1120 TATCGATT-TAA-ATTCGAAGTGT-TGTTTGCAGGATATAAATCNNNNNNNNNNNNNNNN 1176 ||| ||| ||| ||| | | | | ||| | |||| || Sbjct: 3285 TATATATTATAATATTTTATATATATATTT--ATTATATTTAT-ATTTATATAAAAAAGT 3341 Query: 1177 NNNNNNNNTTAAATAAATAAATAA-AATAAATA 1208 |||| ||| ||| | | ||| |||| Sbjct: 3342 GATATTGATTAATTAATTAATTTATAATTAATA 3374 Minus Strand HSPs: Score = 223 (39.5 bits), Expect = 0.014, P = 0.014 Identities = 367/680 (53%), Positives = 367/680 (53%), Strand = Minus / Plus Query: 1448 ATAAAATTCGCGTTCTTTT-TACGT-ATCTGTGTATCTTTTCTTTGCTAAATATACGCTG 1391 ||||| | || | || || | || | | ||| | |||||| ||||| | | Sbjct: 1354 ATAAATAAAGGTTTATATTATAATTCAT-TATTTATATCTTCTTTA-TAAATTAATATTC 1411 Query: 1390 ACATGA-ATTATTTTTTAACTGTTTCTCCTCCAAA---CTTTCAAATATTCAAATTGAAC 1335 || | || || ||||| | | |||| ||| |||| || | | ||| || Sbjct: 1412 GTATTAGATCCTTATTTAATTTATAATCCTTTAAAAAACTTTTAATAAATATAATATAAT 1471 Query: 1334 -TAAATGATAATTCTTGCGCTTCCTTTTTTGAAAAAGTAGATATATGTATCATAAAGAAA 1276 || || |||||| || || |||| | | | | || ||| || ||| | | Sbjct: 1472 ATATAT-ATAATTTTTA---TTATTTTTAT-ATTATTTTTAT-TATTTAA-ATATATTAT 1524 Query: 1275 ACGTTATTGTTATTTTC-TTGGGCAACAAAAATCCATGA-AAAGAATTTCACCGT-TATC 1219 | || | |||| | || || ||| | | | ||| ||| | | | ||| Sbjct: 1525 ATATT-TCATTATAATAATTATTTAA-AAAGTTATTTAATAAATAATCTGATATTATATT 1582 Query: 1218 G-ATA-TCA-TTGTATTTATTTTATTTATT-TATTTA--ANNNNNNNNNNNNNNNNNNNN 1165 ||| | | || ||||||||||||||||| ||| || | Sbjct: 1583 TTATAATTAATTTTATTTATTTTATTTATTATATATATTATTATATATAATTAAAATTAT 1642 Query: 1164 NNNNG-ATTTATATCCTGCAAACAACACTTCGAATTTAAATCGATATTTCAT-AAGTTAC 1107 | ||||| | | || || | || |||| |||| | ||| || || ||| Sbjct: 1643 AATTACAATTATAAC-TATAATTAA-A-TTA-AATT-AAATTAA-ATTGGATTAAATTA- 1695 Query: 1106 AACTAACACTTATAGA-AA-CAGAA-GTATGAGT-ACTTA-TC--ATTA-ACGAGGAAA- 1056 || ||| | | | || | | || | | |||| || | || | | || | Sbjct: 1696 AATTAA-ATTGGGCGCCAAGCCGGTTGT-TCACCGACTTGGTCCCAATATAATATGAGAT 1753 Query: 1055 AATGCCCTATTTTGTTTAGCAATTA-ATGAACCATCGCCAATTTT-TGCTTTAACAATTA 998 ||| ||| | | | | || | || || || ||| | || | ||||| | | Sbjct: 1754 AATATAATATACTATAT-GATATAACATAAAT-ATAATATATTATATGATATAACA-TAA 1810 Query: 997 TTGCCATTTTCAGCAGTACTAACGTAAGATCTAGTGTGGTTCGCTTAGGATGTTTTTGAG 938 | || | | | | | || | | | |||| || ||| | | ||| Sbjct: 1811 ATATAATATACTCCT-T-CGGG-GTCCGCCCCCGCGTGGG-CGGACCGGAC-TATATGAA 1865 Query: 937 TAGAA-ATCTGCTGTGCATGCCATACGCAGTACTTGAAACTTGAAATAATGGTGATAATT 879 || | || | | | || | | | || | | | | |||| | |||||| Sbjct: 1866 TATATTAT-TATTATA-ATTATAAAATTA-TAATAAATAAATAAAATTTCTTTAATAATT 1922 Query: 878 AGTTATTTAAAGTATGTTAATCCTCCTTGTTCTT-TTATATTTATTTCGAATTCTTTTGC 820 | ||| |||| | | ||||| | || | || |||| |||| | || | || Sbjct: 1923 A-TTAATTAATAT-TATTAATT-TATTTACAAATATTTTATTAATTTTTATTTTTATTAA 1979 Query: 819 AC-TAG-TAT-TAAAAATAT 803 | || ||| |||| |||| Sbjct: 1980 ATATAAATATATAAATATAT 1999 >NOT:Q_71503-72630 Chromosome Mito from 71503 to 72630 Length = 1128 Minus Strand HSPs: Score = 220 (39.1 bits), Expect = 0.014, P = 0.014 Identities = 228/407 (56%), Positives = 228/407 (56%), Strand = Minus / Plus Query: 1159 ATTTATATCCTGCAAACAACACTTCGAATTTAAATCGATATTTCATAAGTTACAACTAAC 1100 ||| || | || || || | || |||| | || |||||| ||| ||| | Sbjct: 736 ATTAAT-TACTAAGAATAA-ATTTATAATT-AGATA-ATATTT-ATAT-TTATTTATTT- 788 Query: 1099 ACTTATAGAAACAGAAGTATGAGTACTTATCATTAACGAGGAAAAATGCCCTATTT-TGT 1041 | ||| | |||| | ||| | || || | ||||| | || | ||| | | | Sbjct: 789 ATTTA-ATTAACAAATATATTAATATTTTTAATTAATTAATAATACCTTTATATATATAT 847 Query: 1040 -T-TAGC-A-ATTAATG--AACCATCGCCA-ATTTTTGCT-TTAACAATTATTGCCATTT 989 | || | |||||| || || || ||| | |||| |||||| || | Sbjct: 848 ATATATATATATTAATTTTAATTATATAATTATCTTTTTTATTAATAATTATAAATATAT 907 Query: 988 TCAGCAGTAC-TAACGTAAGATCTAGTGTGGTTCGCTTAGGATGTTTTTGAGTAGAAATC 930 | | | || |||||| || | | ||| | ||||| | || |||| Sbjct: 908 TATATATTTTATATAATAAGAT-TATAATTTTATAATTATTTTATTTTTTATTAAAAAT- 965 Query: 929 TGCTGTGCATGCCATACGCAGTACTTGAAACTTG-AAATAATGGTGATAAT-TAGTTATT 872 | | | || ||| | || | | | || |||| || | ||| || ||||| Sbjct: 966 TATTATT-ATT--ATAATTATTATATTATAATTATAAATTATTAA-AGAATATATTTATT 1021 Query: 871 TAAAGTATGTTAATCCTCCTTGTTCTTTTATATTTATTTCGAATTCTTTTGCACTAGTAT 812 || ||| ||||| | | | ||||||| | ||||| || | | | | ||| Sbjct: 1022 -AA--TATTTTAATAATTAATAT-CTTTTATTTATATTTATAAAA-TAAGGTATAAATAT 1076 Query: 811 TAAAAATATC-AGCAGAGAC-GTAAAAGTGCACCAAAATTATTGTAA 767 | | |||| || | | | ||| | | | | ||| ||| ||| Sbjct: 1077 TGATAATAAAGAGTAAATATTGTATTAATT-ATAATAATAATTATAA 1122 Score = 190 (34.6 bits), Expect = 0.37, P = 0.31 Identities = 356/689 (51%), Positives = 356/689 (51%), Strand = Minus / Plus Query: 1448 ATAAAATTCGCGTTCTTT-TTACGTATCTGTGTAT-CTTTTCTTTGCTAAATATACGCTG 1391 ||| | || | | ||| ||| | | | ||| | || | ||| ||| | Sbjct: 145 ATATATTTATTGATATTTATTAATT-TAAGATTATTCATTAAATATATAATTATTAA-TA 202 Query: 1390 ACATGAAT-TATTTTTTAACTGTTTCTCCTCCAAACTTTCA-AATATTCAAATTGAACTA 1333 | | ||| |||||| ||| | ||| | | | | | || | | | || | || Sbjct: 203 ATTT-AATATATTTTATAATT-TTTATTATATTTTATGTAAGAAGAAACTATTTTA--TA 258 Query: 1332 AATGATAATTCTTGCGCTTCCTTTTTTGAAAAAG-TAGATATATGTATCATAAAGAAAAC 1274 || ||| | | | |||| | |||| | || || | | ||| ||||| | | Sbjct: 259 TATTATATATATATATATAATTTTTAT-AAAATGATAAATTT-TATATTATAAATATTA- 315 Query: 1273 GTTATTGTTATTTTCTTGGGCAACAAAA--ATCCATGAAAAGA-ATTTCACCGTTATCGA 1217 ||| | ||||| | | ||| || || ||||| || | | | || Sbjct: 316 -TTAAAAT-ATTTTTATAAATATTTAAATTATTTATAAAAAGGTATATAATAATAATTAT 373 Query: 1216 TATCATTGTATT-TATT-T-TATTTATTTATTTAANNNNNNNNNNNNNNNNNNNNNNNNG 1160 || ||| |||| |||| | ||||||||||| | | Sbjct: 374 TAATATTATATTATATTATATATTTATTTATATTATATATAATAATATATTTATATATAT 433 Query: 1159 ATTTAT-A-TCCTGCAAACAACACT-TCGAATTTAAATCGATATTTCATAAGTTACAACT 1103 ||| || | | ||| || | | | |||| || ||||| || | || | Sbjct: 434 ATTAATTAATAAATTAAATAAGTATCTATATTTTATATT-ATATTATATTATTTTATTTT 492 Query: 1102 AACACTTATAGAAACAGAAGTATGAGTACTTATCATTAACGAGGAAAAATGCCCTATTTT 1043 | | || ||| |||| | |||| || | | || | | | || |||||| Sbjct: 493 ATTAATTCCGGAAGGAGAATAAAAAGTA-TTCTAAAGAA--ATTATATATTTATTATTTT 549 Query: 1042 GTTTAGCAATTAATGAACCA-TCGCCAATTTTTGCTTTAACAATTATTGCCATTT-TCAG 985 ||| | | || || | | ||| | | || || | | |||| | | Sbjct: 550 TATTAATATGTTATAAATTAATAAAAAATAAATA-TGTATATATAAATTATATTTATTAT 608 Query: 984 CAGTACTAACGTAAGATCTAGTGTGGT-TCGCTTAGGATGTTTTTGAGTAGAAATCTGCT 926 || | | || || || | | | | || | | | | | | | || | | Sbjct: 609 GTTTAATTATTTATAATTTATTATAATATATAGTATAAGATATCTTATTT-ATATTTA-T 666 Query: 925 GTGCATGCCATACGCAGTACT-TGAAACTTGAAA-TA-ATGGTGATA-ATTAG-TTATTT 871 | || | | | | || | | ||||| | || || | ||| |||| |||| | Sbjct: 667 AT--ATAATAAA-GAA-TATTATTAAACTAACACCTATATTAT-ATATATTATATTATAT 721 Query: 870 AA-AGTATGTTAATCCTCCTTGTTCTTT-TATATTTAT--TTCGA-ATTCTTTTGCACTA 816 || | ||| | || | || | || |||||| || || | | ||| || Sbjct: 722 AATATTATATATATATTAATTACTAAGAATAAATTTATAATTAGATAATATTTATATTTA 781 Query: 815 GT-ATTAAAAATATCAGCAGAGACGTAAA 788 | ||| | || | || | | | || Sbjct: 782 TTTATTTATTTAATTAACAAATATATTAA 810 >NOT:Q_26701-27666 Chromosome Mito from 26701 to 27666 Length = 966 Plus Strand HSPs: Score = 219 (38.9 bits), Expect = 0.015, P = 0.015 Identities = 355/675 (52%), Positives = 355/675 (52%), Strand = Plus / Plus Query: 737 TATGAA-GTATCAATTTTAGGGCAAGTAGTTTTACAATAATTTTGGTGCACTTTTACGTC 795 ||| || | || ||| || | || | || ||||| || | ||||| | Sbjct: 268 TATTAATGAAT--ATTATATAATTATTAAATATATTATAATATTATTATTATTTTA--TA 323 Query: 796 TCTGCTGATATTTTTAATACTAGTGCAAAAGAATTCGAAATAAATATA-AAAGAACAAGG 854 | ||||||||||||||| | | ||| ||||||||| ||| | | | Sbjct: 324 A-TAAAAATATTTTTAATACTAATTATTATTTATTATTTATAAATATATAAATAGTATGT 382 Query: 855 --AGGATTAACA-TACTTTAAATAAC-TAATTATCACCATTATTTCAAGTTTCAAGTA-C 909 | |||| | |||| ||| || ||||||| | | || | | | || || | Sbjct: 383 TTAATATTATTAATACTAAAAAAAATATAATTATAATTAGGATCTAACAATACATTTATC 442 Query: 910 TGCGTATGGCATGCACAGCAGATTTCTACTCAAAAACATCC-TAAGCGAACCACACTAGA 968 || || || | | | || | || | | | || ||| || | | | || Sbjct: 443 TGATTAAT--ATTAATATTA-ATAT-TAAT-ATTTATATTAATAAACGGATTAAATTAAT 497 Query: 969 TCT-TACGTTAGTACTGCTGAAA-ATGGCAATAATTGTTAAAGCAAAAATTGGCGATGGT 1026 | | | | | || | | || || | ||| | ||| | | ||| || | Sbjct: 498 TGTATCCAATT-TAAT--TAAATTATAGATATATTATTTATAATATTAATATAT--TGTT 552 Query: 1027 TCATTAATT-GCTAAACAAAATAGGGCATTTTTCCTCGTTAATGATAAG-TACTCATACT 1084 | ||||| | |||| | | | ||||| | | ||| ||| | || ||| Sbjct: 553 TTATTAAAAAGGTAAAAATAGTTTTT-ATTTTATATA-TAAAT-ATAGGATATAAATAAA 609 Query: 1085 TCTGTTTCTA-T-AAGT--GTTAGTTGTAACTTATGAAATATCGATTTAAATTCGAAGTG 1140 | | || || | || | || | || ||| || || ||||| ||| | | Sbjct: 610 TATATTA-TAGTGAACCCCGAAAGGAG-AATATATTAAGAATATATTTATATTTTACATA 667 Query: 1141 TTGTT-TGCAGGATATAAATCNNNNNNNNNNNNNNNNNNNNNNNNTTAAATAAATAAATA 1199 | || | | |||||||| | | | ||||| | Sbjct: 668 TAATTATTTATAATATAAATATCTCCGCAAAGCCGGATTAATGTAATTATTTAATAATTT 727 Query: 1200 AAATAAATACAATGATATCGATAACGGTGAA-ATTCTTTTCATGGATTTTTGTTGCCCAA 1258 | | |||| | | || |||| | | ||| | | || |||| | || | Sbjct: 728 TATTTAATA-ATTTATTAAAATAAATATTTACATT-TGATAAT--ATTTATATTATGTCA 783 Query: 1259 GAAAATA-ACAATAACGTTTTCTTTATGATACATATATCTACTTTTTCAAAAAAGGAAGC 1317 | | | | | ||| |||| | ||| ||| |||| | | ||| | || | | | Sbjct: 784 GTTATTTTATATTAATGTTTAATCTATTATA-ATATTTTTT-TTTATAAATATATTATTT 841 Query: 1318 GC--A-AG-AATTATC-ATTTAGTTCAATTTGA-A-TATTTGAAAGTTTGGAGGAGAAAC 1370 | | |||||| || || | | ||| | | ||| | | ||| | | || Sbjct: 842 ATTTATATTAATTATATATATATATTATTTTTATAATATATATATATTTTTATTA-AAT- 899 Query: 1371 AGTTAAAAAATAATT 1385 | ||| ||||| || Sbjct: 900 ATTTATTAAATATTT 914 >NOT:Q_31014-35373 Chromosome Mito from 31014 to 35373 Length = 4360 Plus Strand HSPs: Score = 212 (37.9 bits), Expect = 0.046, P = 0.045 Identities = 386/742 (52%), Positives = 386/742 (52%), Strand = Plus / Plus Query: 726 TGAATG-TCGAGTATGAAGTATCAATTTTAGGGCAAGTAGTTTTACAAT-AATTT-TGGT 782 ||||| | | ||| ||| || ||| | || | || ||| ||| | | | Sbjct: 1253 TGAATAATATA-TATAAAGCATACATTAGTTAATATTTAATAATATAATCAATATATAAT 1311 Query: 783 GCACTTTTACGTCTCTGCTGATATTTTTAATACTAGTGCA-AAAGAATTCGAAATAAATA 841 | | | | | | | |||| | |||| || || | ||| ||| ||||||| Sbjct: 1312 A-ATTATAAAATAATTAATTATATAAT-AATAATAATGTATAAACAATAT--AATAAATT 1367 Query: 842 -TAAAAGAACAAGGAGGATTAA-CATACTTTAAA-TAACTAATTATCACCATTATTTC-A 897 || || || || | || || |||| | || ||| | | || | || | | | Sbjct: 1368 GTATAA-AATAAA-AT-ATAAATCATAAATAAAGCTAAATTAATAAAATAATAAATGATA 1424 Query: 898 AGTTTCAAG-TACTGCGTATGGCATGCACAGCAGATTTCTACTCAAAAACATCCTAAGCG 956 | ||| || | || | || | | | ||| || | |||| || | | | Sbjct: 1425 AACAAGAAGATA-TCCGGGTCCCAAT-A-AT-A-ATTATTATTGAAAATAATAATTGG-G 1478 Query: 957 AACC-ACACTAGATCTTACGTTAGTACTGCTGAAAATGGCAATAATTGTTAAAGCAAAA- 1014 | || | | |||| || | | || | | || |||||| || | || | Sbjct: 1479 ACCCCATA-TAGAATATAAATAATTAAATATATATATATAAATAATAATTTATATAATAT 1537 Query: 1015 ATTGGCGATGGTTCAT--TAATTGCTA--AA-CAA-AATAGGGC-ATTTTTCCTCGTTAA 1067 ||| || | || ||| | || || | | |||| | | | | |||| Sbjct: 1538 ATTATAAATAAATAATAATAAATATTATTAATCTATAATAATTATAAATATTTTA-TTAA 1596 Query: 1068 TGATAAGT--ACTCATACT-TCTGTTTCTATAAGTGTTAGTTGTAACTTATGAAATATCG 1124 | |||| | | | || | | | ||| ||||| | | | | || |||| Sbjct: 1597 T-ATAAATTTAATAATTATATATATTTTTATAATAACTCCGAAAGAGTAAGGAGATATTA 1655 Query: 1125 ATTTAAATTCGAAGTGTTGTTTGCAGGATATAAATCNNNNNNNNNNNNNNNNNNNNNNNN 1184 |||| | || | || || | | |||| | Sbjct: 1656 ATTTCTTATAAAAAT-TTATTAATAATA-ATAA-TATATAAAATATATAAATAATATATT 1712 Query: 1185 TTAAATAAA-TAAA-TAAAATAAATACAATGATATCGATAACGGTGAAATTCTTTTCATG 1242 || ||||| |||| ||||||||||| | | |||| | || ||||| | |||| || Sbjct: 1713 ATATATAAAATAAAATAAAATAAATA-A-T-ATATTAAAAATATTGAAAGTATTTTAATA 1769 Query: 1243 GATTTTTGTTGCCCAAGAAA-ATA-ACAATAACGTTTTCTTTATGATACATATATCTACT 1300 || | | || | || | ||||| | | | | | | ||| || Sbjct: 1770 AATAATAAATTTAAAATTCATATTTATAATAATAAATAAATAAATAAATAAATAAGTAAA 1829 Query: 1301 TTTTCAAAAA---AGGAAGCGCAAGAATTATCATTTAGTTCAATTTG-AATATTTGAAAG 1356 | || | | | || || | |||| |||| || ||| |||| | ||| Sbjct: 1830 TATTTAGATTCTCATTAATATTAATATTTAT-ATTTCTTTTTTTTTATAATAATAAAAAT 1888 Query: 1357 TTTGGAGGAGAAACAGT-TAAAAAATAAT-TCATGTCAGCGTATATTTAGCAAAGAAAAG 1414 | | | ||| | || || ||||| | || ||||| || || ||| Sbjct: 1889 ATCATAT-ATAAATATAATATAATATAATATAATAAATTATTATATATAAATAATAAATA 1947 Query: 1415 ATACACAGA-TACGTAAAAAGA 1435 || | | | || ||| || | Sbjct: 1948 TTAAATATAATATATAATAATA 1969 Minus Strand HSPs: Score = 215 (38.3 bits), Expect = 0.034, P = 0.033 Identities = 331/616 (53%), Positives = 331/616 (53%), Strand = Minus / Plus Query: 591 AGCACCTAACTACTGT-ATTTTGGAATTTTGATAAACTTCAAAACGGGAACGAAGTG-TT 534 || || ||| || | | ||| | ||| | || | || |||| | | | | || Sbjct: 447 AGTACATAATTAATATTATTATA-AATAAT-ATTA--TTAAAAA-GAATATAATATAATT 501 Query: 533 AA-ACTTAGATGCGGTTGACTTAAGCTTTAAAAGAGGAAAATAATGACTGATGATAAGAA 475 || | ||| | | | ||| | |||| | ||||||| | | | |||| || Sbjct: 502 AATAGAAAGACGTTTTAAAAATAAAAATAAAAATA--AAAATAAAAA-TAAAAATAAAAA 558 Query: 474 TTCAACAACGATTCAAAGCAGGTGAA-TTTCCATTACGTTTCGCTTTTCAATTGAAAAAA 416 | || | | | |||| || | ||| ||| | | | ||||||||||| | Sbjct: 559 TAAAAATAAAAATAAAAG-AGTTTTGGTTTACATATCAAGACCCAATTCAATTGAAACTA 617 Query: 415 ATTTGGTGGTTATTCGTTTCTTGCTTGACCTCTTTACTTTTTATACTT-CTGTGATGAGA 357 ||| | ||| || || || |||| || || ||||| | | | | | | Sbjct: 618 -TTTATTTATTAATCTCCTCCC-CTCCCCCTCACTA-TTATTATAAGTACAATTAGG-GC 673 Query: 356 AGCAAGTTCG-AG-GAT-TTTAC-GATAAA-GCCTACTGGTTATATTTGTATAAATTAGA 302 ||| || || | | ||||| | ||| | || | || | || || ||| Sbjct: 674 GCCAACCCCGCAGTGTTATTTACTGGGAAATGTTTA-TCCCAATTAATATAATAACGAGA 732 Query: 301 ACG-TTG-TCCTTATTTCTCTTTTCGAACAGTATCA-A-AATA-AA-GTTTTTGATCAGG 248 || | |||||| | ||| | | | | | | ||| || || || || || Sbjct: 733 GTTATTAATTATTATTTATAAATTCATATAATGTAATATAATGTAATGTAATTAAT-AGA 791 Query: 247 GCCAGATTCTCTTCAAGGAAGAGATACCTCACGTCTGTAATATCTAAGAGCTAATGTTTC 188 | ||| | || | | || | | | | | | | ||| | | | || || Sbjct: 792 ACATTATTGTGTT-ATTCACCAG-TGT-TAAGATATATTA-ATCCCA-ATTTTAT-TTAA 845 Query: 187 GATCGAACTTTCCTTTGCTTTTTTTCTGGATCTC-ATGAGGTCCCACTGTATGTATGTGC 129 | ||| || || || || || ||| || | | | | || ||| | Sbjct: 846 TAGTGAAGATTATATTTTATTAATTATGAATCCATATTAT-TATTATTTAATATATTTAT 904 Query: 128 CCTCGCACAGTTT-TGCTCATCATAAACA--TTA-ATCATTG--GTTTTATGATAAGAAT 75 | | | | | | || ||||| | ||| || | ||||||| | || ||| Sbjct: 905 AATATTATATATAATTATAATTATAAATAATTTATATAAAAAAAGTTTTATTAAAA-AAT 963 Query: 74 ATCGT-AAGAAT-TATT-TTAACTTTCAGATTAGATTCCGGCCATATTTCTGACATTTGT 18 || | || ||| || | |||| | | || | | | ||| | | | | | Sbjct: 964 ATTATTAAAAATATAATATTAATAATAA-ATAAAAATAATATTATACTCTTAATAGAATT 1022 Query: 17 TTTATTAATAAAAATT 2 | || | ||||||||| Sbjct: 1023 TATAATGATAAAAATT 1038 >NOT:Q_4415-6546 Chromosome Mito from 4415 to 6546 Length = 2132 Minus Strand HSPs: Score = 208 (37.3 bits), Expect = 0.064, P = 0.062 Identities = 308/593 (51%), Positives = 308/593 (51%), Strand = Minus / Plus Query: 1314 TCCTTTTTTGAAAAAGTAG-ATATATGTATCATAAAGAAAACGT-TATTGTTATTTTCTT 1257 | |||| | || || | | || | | ||| || || | | ||| | || | | Sbjct: 893 TACTTTAAT-AATAATTTGTATTTCTTTATTATTAATATATTAAATATAATAATAAT-TA 950 Query: 1256 GGGCAACAAAAATCCATGAAAAGAATTTCACCGTTATCGATAT-CATTGT-ATTTATTTT 1199 || | ||| || || | || | | || |||| | || | || || ||| Sbjct: 951 ATATAATTACAATATATTAATATTATCAAATATTAATAAATATACTTTTTTATATAATTT 1010 Query: 1198 ATTTATTTATTTAANNNNNNNNNNNNNNNNNNNNNNNNGATT-TATATCCTGCAAACAAC 1140 ||||||||||||| ||| || | | | ||| | Sbjct: 1011 ATTTATTTATTTATTTTTTTTTTATTAAACTAATTATA-ATTGTAATTTC-G-AAA-AGG 1066 Query: 1139 ACTTCGAATTTAA-ATCGATATTTCATAAGTTACAACTAACACTTATAGAAACAGAAGTA 1081 | | | | || || ||| || |||| || | || | |||| || | Sbjct: 1067 GGGTGGGAGTAAACATATATAATTTATAATCTATATATAT-ATATATATAATTTTTTA-A 1124 Query: 1080 TGAGTACTTATCATTAACGAGGAAAAATGCCCTATTT-TGTTTAGCA-AT-TAATGAACC 1024 | | || | || | || | ||||| | |||| | |||| | || |||| | Sbjct: 1125 TAAATATTAATAAATATTTAT-AAAAA-GAATAATTTATATTTATAATATATAATTTAT- 1181 Query: 1023 ATCGCCAATTTTTGCTTTAACAATTA-T-TGCCATTTTCAGCAGTACTAACGTAAGATCT 966 || |||||| | || |||||| | | || | | | || | || || Sbjct: 1182 ATATTTTATTTTTATTATA-CAATTAATATAAAATATAAAATATTAAATATTAAATATTA 1240 Query: 965 AGTGTGGTTCGCTTAGGATG--TTTTTG-AGTAGAAATCTGCTGTGCATGCC-ATACGCA 910 | | | | | || ||||| || | || | | || ||| | Sbjct: 1241 AATATTAAATATTAAATATTAATTTTTATAGGGGTTATATAATAATTATATTTATAATTA 1300 Query: 909 G-TACT-TGAAACTTGAAATAATGGTGATAATTAGTTATTTAAAGTATGT-TAATCCTCC 853 || | | ||| | || | | || |||| | |||| ||| | ||| | Sbjct: 1301 TATAATATTAAAAAGGGTATTTTTATAATTATTACATTTTTATTTTATTTATAAAAATA- 1359 Query: 852 TTGTTCTTTTATATTTATTTCGAATTCTTTTGCACTAGTATTAAAAATATCAGCAGAGAC 793 || | ||| ||| |||| |||| |||| | || ||| ||| || | | | | | Sbjct: 1360 TTAAT-TTTAATAAGTATT--GAATACTTTAT-A-TAATAT-AAATAT-TAATTACATAA 1412 Query: 792 GTAAAAGTGCACCAAAATTATTGTAAAACTACTTGCCCTAAA-ATTGATACTT 741 ||| | | | || ||| | ||| | || || | | ||| ||| || Sbjct: 1413 TTAATAATTAAATAATATT-TAATAATATTATTTAAATTTATTATTTATAATT 1464 Score = 188 (34.3 bits), Expect = 0.54, P = 0.42 Identities = 230/433 (53%), Positives = 230/433 (53%), Strand = Minus / Plus Query: 1403 TAAATATACGCTGACATGAATTATTTTTTAACTGTTTCTCCTCCAAACTTTCAAATATTC 1344 ||||||| | || | || | ||| | || | | || | | |||||| Sbjct: 1253 TAAATATTAATTTTTAT-AGGGGTTATATAA-TAATTATATTTATAATTATATAATATTA 1310 Query: 1343 AAATTGAACTAAATGATAATTCTTGCGCTTCC-TTTT-TTGA-AAAAGTAGATATATGTA 1287 ||| | | | |||||| || | || |||| || | |||| || || | | Sbjct: 1311 AAAAGGGTATTTTT-ATAATTATTACATTTTTATTTTATTTATAAAAATATTAATTTTAA 1369 Query: 1286 TCA-TAAAGAAAACGTTAT-TGTTATTT-TCTTGGGCAACAAAAATCCATGA--AAAGAA 1232 | | || ||| || |||| | ||| | || | || || | || | ||| || Sbjct: 1370 TAAGTATTGAATACTTTATATAATATAAATATTAATTA-CATAATTA-ATAATTAAATAA 1427 Query: 1231 T-TTCACCGTTATCGATATCATTGTATTTATTT-TATTTATTTATTTAANNNNNNNNNNN 1174 | || | ||| || | | | |||| |||| || ||||||||||| Sbjct: 1428 TATTTAATAATATT-ATTTAAATTTATT-ATTTATAATTATTTATTTATAAAATTCTATT 1485 Query: 1173 NNNNNNNNNNNNNGATTTATATCCTGCAAACAACACTTCGAATTTAAATCGATATTTCAT 1114 ||||| | | | || | || ||| ||| | |||| || Sbjct: 1486 TTTATTATTATTATTTTTATTTTATTATTA-AAGA-TT--AATATAA-TAATTATTA-AT 1539 Query: 1113 AAGTTACAA--CTAACACTTATAGAAACAGAAGTATGA--GTACTTATCATTAACGAGGA 1058 | ||| || || | ||||| || | || | ||| ||| | || || | Sbjct: 1540 ATATTAAAAATCTTTTA-TTATATTAATATTTATAAAAAAGTATTTAATAAAAAAGATGT 1598 Query: 1057 A-AAATGCCCTATTTTGTTTAGCAATTAATGAACCATCGCCAATTTTTGCTTTAACAAT- 1000 | |||| || || | || | ||| | | || | | | | |||| | Sbjct: 1599 ATAAATTTA-TAAATTATATAATA-TTATTAATTTATATAATAATAATATTATAACTTTG 1656 Query: 999 T-ATTGCCATTTT 988 | |||| || ||| Sbjct: 1657 TGATTGTCAATTT 1669 >NOT:Q_50097-51052 Chromosome Mito from 50097 to 51052 Length = 956 Plus Strand HSPs: Score = 204 (36.7 bits), Expect = 0.074, P = 0.071 Identities = 140/240 (58%), Positives = 140/240 (58%), Strand = Plus / Plus Query: 1188 AATAAATAAATAAAATAAATACAATGATATCGATAACGGTGAAATTCTTTTCATGGATTT 1247 |||||||||| ||||||||| ||| |||| ||| | || | | | | || | Sbjct: 72 AATAAATAAAATAAATAAATA-AATAATATATATATATATATAAATATATAAAATAATAT 130 Query: 1248 TTGTTGCCCA-AGAAA-ATAACAATA-ACGTTTTCTTTATGATACATATATC-TACTTTT 1303 || | | | | | |||| ||| | | ||| ||| | ||||| || || Sbjct: 131 TTACTTTTTATATATATATAATTATATATAAATAAAATATAATATA-ATATCATATAATT 189 Query: 1304 TCAAAAAAGGAAGCGCAAGAATTATCATTTAGTTCAATT-TGAAT-ATTTGAAAGTTTGG 1361 | |||| || | | |||| | || | || | | ||| | || || ||| Sbjct: 190 ATATAAAAATAAAATTATAATTTATT-TATATTAAAAATATTAATTAATT-AATTTTTTT 247 Query: 1362 AGGAGAAACAGTTAAAA-AATAATTCATGTCAGCGTATATTTAGCAAAGAAAAG-ATACA 1419 | | || | ||| || ||||||| | | | || || | |||| |||| ||| | Sbjct: 248 AT-ATAATTA-TTATAATAATAATTTAATTAAAAATAAATAT--CAAATAAAATTATAAA 303 Score = 188 (34.3 bits), Expect = 0.42, P = 0.34 Identities = 148/265 (55%), Positives = 148/265 (55%), Strand = Plus / Plus Query: 1193 ATAAATAAAATAAATACAATGATATCGA-TAACGGTGAAATTCTTTTCATGGATTTTTGT 1251 | |||||||||||||| ||| | || | ||| || | | | || || | | | Sbjct: 55 AGAAATAAAATAAATATAATAA-ATAAAATAAATAAATAAATAATAT-ATATATATATAT 112 Query: 1252 TGCCCAAGAAAATAACAATAACGTTTTCTTTATG-ATACATATATCTACTTTTTCAAAAA 1310 | ||||||| | | || |||| | ||| ||| ||||| || | | || Sbjct: 113 AAATATATAAAATAATATTTACTTTTTATATATATATAATTATATATAAATAAAATATAA 172 Query: 1311 AGGAAGCGCA-AGAATTATC--ATT-TAG--TTC-AATTTGAATAT-TTGAAAGTTTGGA 1362 || || | |||||| | || || ||||| ||| || ||| | | | Sbjct: 173 TATAATATCATATAATTATATAAAAATAAAATTATAATTTATTTATATTAAAAATATTAA 232 Query: 1363 GGAGAAACAGTTAAAAAATAATTCATGTCAGCGTATATTTAGCAAAGAAAAGATA-CACA 1421 | | || | |||||| | | | || ||||| || || | ||| || | Sbjct: 233 TTAATTAATTTTTTTATATAATTATTATAATAATA-ATTTAATTAAAAATAAATATCAAA 291 Query: 1422 GATACGTAAAAAGAACGCGAATTTT 1446 | | || ||| | | | ||| Sbjct: 292 TAAAATTATAAATTAATCCTACTTT 316 Score = 181 (33.2 bits), Expect = 0.90, P = 0.59 Identities = 141/242 (58%), Positives = 141/242 (58%), Strand = Plus / Plus Query: 1186 TAAATAAATAAATAAAATAAATACAATGATATCGATAACGGTGAAATTCTTTTCATGGAT 1245 ||||||||||||||| ||| ||| | | |||| ||| | |||| | || | | Sbjct: 83 TAAATAAATAAATAATATATATATA-T-ATATAAATATA--TAAAATAATATTTACTT-T 137 Query: 1246 TTTTGT-TGCCCAAGAAAATAACAATAACGTTTTCTTTATGATACATATATCTACTTTTT 1304 || | | | || | ||| ||||| | | | || || |||||| || | | Sbjct: 138 TTATATATATATAATTATATATAAATAAAATATAATATAATAT-CATATAATTA-TATAA 195 Query: 1305 CAA-AAAAGGA-AGCGCAAG-A-ATTATCA-T-TTAGTTCAATTTGAATATTTGA-A-AG 1356 || |||| | | | | |||| | | ||| || |||| | | ||| | | | Sbjct: 196 AAATAAAATTATAATTTATTTATATTAAAAATATTAATT-AATTA-ATTTTTTTATATAA 253 Query: 1357 TTTGGAGGAGAAACAGTTAAAAAATAATTCATGTCAGCGTATATTTAGCAAAGAAAAGAT 1416 || | | || | |||| || ||| || ||| || | ||| ||| || | Sbjct: 254 TTATTATAATAATAATTTAATTAAAAATAAATATCAAA-TAAAATTAT-AAATTAATCCT 311 Query: 1417 AC 1418 || Sbjct: 312 AC 313 >NOT:Q_29266-30874 Chromosome Mito from 29266 to 30874 Length = 1609 Plus Strand HSPs: Score = 205 (36.8 bits), Expect = 0.082, P = 0.079 Identities = 367/683 (53%), Positives = 367/683 (53%), Strand = Plus / Plus Query: 740 GAAGTATCAATTTTAGGGCAAGTAGTTTTACAATAATTTTGGTGCAC-TTTTACGT-CTC 797 |||| | |||| || || || |||| |||||| || | ||||| | | Sbjct: 611 GAAGGAGAAATTATAA--CA--TATTTTTT-AATAATATTCATATTTATTTTATATACAA 665 Query: 798 -TGCTGATATTT-TTAATACTAGTGCAAAAGAATTCGAAATAAATATAAAAGAA-CA--A 852 | |||||| || | | || | |||| ||| ||||||||||| | | || | Sbjct: 666 ATAAATATATTTATTTAGAATAATAAAAAAAAATAATAAATAAATATATTATTATCATTA 725 Query: 853 GGAGGATTAA--CATACTTTAA-ATAACTAATTATC-ACCATTATTTCAAGTTTCAAGTA 908 | || | ||| |||| |||| ||||||| | | ||| || | || || Sbjct: 726 TTATACTTTATTCATTATTTATTATAA-TAATTATATATAACAATTATAATATATAATTA 784 Query: 909 CTGCGTATGGCATGCACAGCAGATTTCTACTCAAAA-ACATCCTAAGCGAACCACACTAG 967 ||| || | | | ||| || | || | | | || | || | Sbjct: 785 TATTTTAT---ATA-ATATTATATTAATATTTAATATATTTATTATTATTATTACT-TCT 839 Query: 968 ATCTTA-CGTTAGTACTGCTGAAAATGGCAATAATTGTTA--AAGCAAAAATTGGCGATG 1024 || | | ||| || | || | | | || || ||| || | ||| | || Sbjct: 840 ATGGAAACTTTA-TATTTTAGATATTTTTATTA-TTATTATTAATTTATAAT--GTTATA 895 Query: 1025 GTTCATTAATTGCTAAACAAAATAGGGCATTTTTCCT-CGTTAATGATAAGTACTCATAC 1083 || || ||| |||| | | || | |||| | || | | | | | | || Sbjct: 896 TTT--TTGATTTATAAATATATAAGTCCCGGTTTCTTACGAAACCGGGACCT-CGGAGAC 952 Query: 1084 TTCTGTTTCTATAAGTGTTAGTTG-TAACTTATGA-AATATCGATTTAAATTC-GA--AG 1138 | | | | | | | || ||| | | | ||||| | | |||| | || | Sbjct: 953 GTAA-TAGGGGGAGGGGGTGGGTGATAA-TAACCAGAATATTCAAT-AAATACAGAGCAC 1009 Query: 1139 TG-TTGTTTGCAGGATATAA-AT--CNNNNNNNNNNNNNNNNNNNNNNNNTTAAATAAAT 1194 || | | ||||| || | |||| || || Sbjct: 1010 ACATTAGATAAATTTTATAATATAACCAATATAAAATAAAATTAAAATAATTAA-TATAT 1068 Query: 1195 AAATA-AAATA-AATACAATGAT-ATCGATAACGGTG-A-AATTCTTTTCATGGATTTTT 1249 | ||| ||||| |||| ||| || || |||| | | |||| || | || || || Sbjct: 1069 ATATATAAATATAATA-AATTATTATATATAAATATATATAATTTTTATAATAAATATTA 1127 Query: 1250 GTTGCCCAAGA-AAATAACAATAACGTTTTCTTTATGATACATATATC-TACTTTTTCAA 1307 | | | |||||| | ||| | | | ||| ||| |||||| || | | || Sbjct: 1128 -TAATATTATATAAATAA-A-TAAT-TATAATATATAATAAATATATAATAATAATA-AA 1182 Query: 1308 AAAAGGAAGCGCAAGAATTATCATTTAGTTCAATTTGAATATTTGAAAGTTTGGAGGAGA 1367 || | || | | ||| | ||||| | ||| | ||||| ||| | | | || Sbjct: 1183 AATATTAA-CAATATAATAAAAATTTA-T--AATATAAATAT---AAATTATAAATAAGT 1235 Query: 1368 AACAGTTAA-AAAATAATTCATG 1389 | | |||| |||||||| ||| Sbjct: 1236 TAAA-TTAATAAAATAATAAATG 1257 Score = 175 (32.3 bits), Expect = 2.0, P = 0.87 Identities = 189/344 (54%), Positives = 189/344 (54%), Strand = Plus / Plus Query: 801 TGATATTTTTAATACTAGTGCAAAAGAATTCGAA-ATAAATATAAAAGAACAAGGAGGAT 859 | | | | |||| | || |||| | || || ||||||||||| | || || | Sbjct: 1179 TAAAAATATTAACAATATAATAAAA-ATTTATAATATAAATATAAATTATAAATAAG--T 1235 Query: 860 TAACATACTTTAA-A-TAACTAATTATCACCATTATTTCAAGTTTCA-AGTACTGCGTAT 916 ||| || | || | ||| | |||| || | || || | || | || | ||| Sbjct: 1236 TAAATTAATAAAATAATAAATGATTAACAAGAAGATATCTGGGGTCCCATTAATAATTAT 1295 Query: 917 GGCATGCAC-AGCAGATTTCTACTCAAAAACATCCTAAGCGAACCACACTAGATCTTACG 975 | || | | ||| || | | ||| ||| | | | | || | || Sbjct: 1296 TATTTTCAATAATA-ATTGGGACCCCCCACCATTATAAT--ATC-ATATTAATTAATATA 1351 Query: 976 TTAGTACTGC-TG-AAAATGGCAATAATTGTTAAAGCAAAAATTGGCGATGGTTCATTAA 1033 || || || | ||||| | |||||| |||| || ||| || | || || Sbjct: 1352 ATAATAATGTATATAAAATAGAAATAATAATTAATATAATAATAATA-ATATAT-ATAAA 1409 Query: 1034 TTGCTAAACAA-AATAGGGCATTTTTCCTCGTTAATGATAAGTACTCATAC-TTCTGTTT 1091 | ||| || ||| || | | | |||| || || | ||| || | | Sbjct: 1410 ATAG-AAATAATAATTAAATATATATA-TAAATAATTATTTATA-TAATATATTATAAAT 1466 Query: 1092 C-TA-TAAGTGTTAGTTGTAACTTATGAAATATCGATT-TAAAT 1132 || ||| | | | | | | || || || |||| ||||| Sbjct: 1467 AATAATAATAATAAATATTTATTAATTAATAAT-GATTATAAAT 1509 >NOT:F_104456-104695 Chromosome 6 from 104456 to 104695 Length = 240 Plus Strand HSPs: Score = 147 (28.1 bits), Expect = 0.20, P = 0.18 Identities = 89/144 (61%), Positives = 89/144 (61%), Strand = Plus / Plus Query: 1187 AAATAAATAAATAAAATAAATACAATGATATCGATAACGGTGAAATTCTTTTCATGGATT 1246 ||| |||||||||||| ||| | || | | |||| ||| || || || || | Sbjct: 105 AAAAAAATAAATAAAAAAAAAAAAAAAAAA---ATAA-GGTATAAATCGTT----GGTTC 156 Query: 1247 TTTGTTGCCCAAGAAAATAACAATAACGTTTTCTTTATG-ATA--CATATATCTA-CTTT 1302 ||| ||| ||| | |||| ||| | | |||| | | | | | ||| | | || Sbjct: 157 TTTTATGCACAATTATTTAACTATAGTTATCTATTTACGTAAAGGCTTCTATTTTTCCTT 216 Query: 1303 TTCAAAAAAGGAAGCGCAAGAATT 1326 || | || | || ||| ||| | Sbjct: 217 ATCTACAA-GAAATTGCATGAAGT 239 >NOT:L_673336-673830 Chromosome 12 from 673336 to 673830 Length = 495 Plus Strand HSPs: Score = 186 (34.0 bits), Expect = 0.27, P = 0.24 Identities = 102/165 (61%), Positives = 102/165 (61%), Strand = Plus / Plus Query: 1231 ATTCTTTTCATGG-ATTTTTG-TTGCCCAAGAAA-ATAACAATAACGTTTTCTTTATGAT 1287 ||||||| || || ||||| | ||||| || | | | ||||| ||| | | | Sbjct: 273 ATTCTTTACAAGGGATTTTCGGTTGCCAAAAACAGAGAACAAATGCGTAGAAATACTCA- 331 Query: 1288 ACATATATCTACTTTTTCAAAAAAGGAAGCGCAAGAATTA--TCATTTAGTTCAATTTGA 1345 | || || | |||||||||||| ||| | || | | ||| ||| || | || Sbjct: 332 ATG-ATGTCAA-TTTTTCAAAAAATGAATTAAATGATTGAAGTCACTTAATTTT-TGTGG 388 Query: 1346 ATATTTGAAAGTTTGGAGGAGAA-ACAGTTAAAAAATAATTCATG 1389 | |||| | || || ||| ||| | | | ||||| ||| Sbjct: 389 TTTTTTGGAGGTG-GGTTGAGTGTACAACTCACTA-TAATTGATG 431 >NOT:Q_78608-79213 Chromosome Mito from 78608 to 79213 Length = 606 Minus Strand HSPs: Score = 178 (32.8 bits), Expect = 0.90, P = 0.59 Identities = 140/242 (57%), Positives = 140/242 (57%), Strand = Minus / Plus Query: 1419 TGTATCTTTTCTTTGCTAA-ATATACGCTGACATGAATTATTTTTTAACTGTTTCTCCTC 1361 | ||| ||| ||| | | || || | | || || | || || | | | | Sbjct: 338 TATATTATTTATTTAATTATATTTAATTTAA-ATATATAAATTAATATATATATATTGAA 396 Query: 1360 CAAACTTTCAAAT-ATTC-A-AATTGAACTAAATGATA-ATTCTTGCGCTTCCTTTTTTG 1305 | | | || | ||| | |||| | ||||| ||| ||| || | ||| | Sbjct: 397 TTATATATAAATTTATTTTATAATTTTA-TAAATAATATATTATTATAAATA-TTTAAT- 453 Query: 1304 AAAAAGTAGATATATGTATCATAAAGAAAACGTTATTGTTATTTTCTTGGGCA-ACAAAA 1246 | || || || ||| ||| |||| |||| | | || ||| || | | || Sbjct: 454 ATAATTTATAT-TAT-TAT--TAAATAAAA-GAT-TTATTAAATTAATATTATTATTTAA 507 Query: 1245 ATCCATGAAAAGAATTTCACCGTTATCGATATCATTG-TATTTATTTTATTTATTTATTT 1187 | || | | | ||| | | || || | ||| ||||| |||||||||||||||| Sbjct: 508 TTTTATTATAT-AGTTTAAGGGATAAT-ATTTTATTAATATTTTTTTTATTTATTTATTT 565 Query: 1186 AA 1185 || Sbjct: 566 AA 567 Score = 160 (30.1 bits), Expect = 6.6, P = 0.999 Identities = 178/329 (54%), Positives = 178/329 (54%), Strand = Minus / Plus Query: 1306 TGAAAAAGTAGATATATGTATCATAAAGAAAACGTTATTG-TTATTT-TCTTGGGCAACA 1249 | | ||| || || || || ||| || || ||| |||||| | || | | Sbjct: 240 TAATAAAATATTTAAATAAATTATATTCAATACAA-ATTAATTATTTATATTATT--A-A 295 Query: 1248 AAAATCCATGAAAAGAATTTCACCGTTATCGATATCA-TTGTATTTATTTTATTTATTTA 1190 || | || ||| ||| || | ||||| | || ||| || ||||||||||| Sbjct: 296 TAATTGAAT--AAATAATCCGGTCGAAAGAGATATTAATTCGATT-ATATTATTTATTTA 352 Query: 1189 TTTAANNNNNNNNNNNNNNNNNNNNNNNNGATTTATATCCTGCAAACAACACTTCGAATT 1130 ||| || ||||| || || | | | |||| Sbjct: 353 ATTATATTTAATTTAAATATATAAATTAATATATATATATTG-AATTAT-ATATA-AATT 409 Query: 1129 TAAATCGATA-TTTCATAAGTTACAACTAACACTTATAGAAACAGAAGTATGAGT-AC-T 1073 || | ||| ||| |||| | | | || | ||||| | | || ||| | | | | Sbjct: 410 TATTTT-ATAATTTTATAAATAATA--TATTA-TTATAAATATTTAA-TATAATTTATAT 464 Query: 1072 TATCATTAACGAGGAAAAATGCCCTATTTTG-T-TTAGCAATTAATGA-ACCATCGCCAA 1016 ||| ||||| | ||| || || || | ||| | ||||| | || | Sbjct: 465 TATTATTAAATA--AAAGATTTATTAAATTAATATTATTATTTAATTTTATTATAT--AG 520 Query: 1015 TTTTTGCTTTAACAATT-ATTGCCATTTT 988 ||| | ||| | || ||| ||||| Sbjct: 521 TTTAAGGGATAATATTTTATTAATATTTT 549 >NOT:Q_9447-11667 Chromosome Mito from 9447 to 11667 Length = 2221 Plus Strand HSPs: Score = 180 (33.1 bits), Expect = 1.3, P = 0.72 Identities = 328/630 (52%), Positives = 328/630 (52%), Strand = Plus / Plus Query: 827 AATTCGAAATAAATATAAAAGAACAAGGAGGATTAACATACTTTAAATAACTAATTATCA 886 |||| || ||||| |||| || || ||| || || || | ||||| || |||| | Sbjct: 657 AATTA-AATTAAAT-TAAATTAAGAAAGAG-ATAAATTTATATAAAATAT-TATTTATAA 712 Query: 887 CCA-TTATT-TCAAGTTTCAAGTACTGCGTATGGCATGCACAGCAGATTTC-TACTCAAA 943 | |||| | || || || || | ||| || | | | || | || | | Sbjct: 713 TTAATTATAATTAAATTATAA-TA-TAA-TATAATATAAATAATA-ATATAATAAAAATA 768 Query: 944 AACATCCTAAGCGAACCACACTAGATC-T-TACGTTAG-TACTGCTG-AA-AATGGCAAT 998 || || || | | | || || | || ||| || | | || ||| ||| Sbjct: 769 AAAATAA-AATAATATTAGATTATATTATATAATTTATATAATTTTTTAATAATAATAAT 827 Query: 999 AATT--GTTAAAGCAAAAAT-TGGCGATGGTTCATTAAT-TGC-TAAACAAAATAGGGCA 1053 || | ||| | | || | | || | || ||| | |||| || || | Sbjct: 828 AAATAAGTTTATTTATAATTATAAATATAAAT-ATAAATATAAATAAAGAAGGTATTATA 886 Query: 1054 TTTTTCCTCGT-TAATGATAAGTACTCATACTTCTGTTTCTATAAGTGTTAGTTGTAACT 1112 |||| | |||| |||| ||| | | || | ||| |||| | ||| | ||| | Sbjct: 887 TTTTATAAAATATAATAATAA-TACAAA-ATTTATATTTTAATAAATATTAATA-TAAGT 943 Query: 1113 TATGAAATATCGATTTAAATT-CGAAGTGTTGTTTGCAGGATATAAATCNNNNNNNNNNN 1171 | | || | || || | | | | || | | Sbjct: 944 T-TAAAGTTCCGGGGCCCGGCACGG-GAGCCGGAACCCCGAAAGGAGA-AATAAATAATA 1000 Query: 1172 NNNNNNNNNNNNNTTAAATAAATAAATAAAATAAATACAATGATATCGATAACGGTGAAA 1231 ||||||||||||||| || || || ||| |||| | | | Sbjct: 1001 TATTTATAAAAAATTAAATAAATAAATATTATCTATTTAAAAATAAATATAATA-TAATA 1059 Query: 1232 TTCTTTTCATGGATTTTTGTTGCCCAAGAAAATA-ACAATAACGTTT-TCTTTATGATAC 1289 | | | || ||| | | || || || | |||| || | | || || Sbjct: 1060 TAATATA-ATA-ATTCTAAATATA-AATAATATTTATTATAATTATTATAATAATTGTAT 1116 Query: 1290 -ATATATCTACTTTTTCAAAAAAGGAAGCGCAAGAATTATCATTTAGTTCAATTTGAATA 1348 || ||| || | | | | || | || | | || ||| || | |||| ||| Sbjct: 1117 TATTTAT-TAATAATATATATAATTATATTAAA-ACTAAT-ATTACATT-ATTTTGTATA 1172 Query: 1349 TTTGAAAGTTTGGAG-GAGAAA-C--AGTTAAAAAATA-ATTCATGTCAGCGTATAT-TT 1402 ||| || || | || | | | || || | ||| || | | ||||| || Sbjct: 1173 TTTAAACAATTAAATTGATTATTCTTATTTGTAATCTTTATTTATTTTAT--TATATCTT 1230 Query: 1403 AGCAAAGAAAAGATACACAGATACGTAAAA 1432 | || || || || | || ||||| Sbjct: 1231 ATTAATGATAAATTATAATTATTATTAAAA 1260 >NOT:Q_35444-36540 Chromosome Mito from 35444 to 36540 Length = 1097 Minus Strand HSPs: Score = 177 (32.6 bits), Expect = 1.5, P = 0.77 Identities = 129/225 (57%), Positives = 129/225 (57%), Strand = Minus / Plus Query: 1403 TAAATATACGCTGACATGAATTATTTTTTAACTGTTTCTCCTCCAAACTTTCA-AATATT 1345 ||||| | | | || ||| | | ||||| | | | | | | | |||| | Sbjct: 409 TAAATTAATAATAATATAAATAACATATTAACAATAAATTATTGTTAATATAATAATAAT 468 Query: 1344 CAAATTGAACTAAATGA-TAATTCTTGCGCTTCCTTTTTTGAAAAAGTAGATATATGTAT 1286 | | | | ||| | |||| | || | | | | | || ||| || | | Sbjct: 469 AATAACAATATTAATAAATAATA-TAAAAATTATTAATATTATATT-TATATA-ATAT-T 524 Query: 1285 CATAAAGAAAACGTTATTGTTATT--TTCTTGGGCAACAAAAATCCATGAAAAGAATTTC 1228 ||| | ||| | || | |||| || || || || ||| || | ||| | Sbjct: 525 AATATAAAAATCTTTCATAATATTAATTATTATTAAATAATAATG-ATATCATTAATATT 583 Query: 1227 ACCGTTATCG--A-TATCATTGTATTTATTTTATTTATTTATTTA 1186 | | |||| | ||| ||| ||||||||| ||||||||||||| Sbjct: 584 AATATAATCGTCAATATTATT-TATTTATTT-ATTTATTTATTTA 626 >NOT:D_149087-149204 Chromosome 4 from 149087 to 149204 Length = 118 Plus Strand HSPs: Score = 132 (25.9 bits), Expect = 2.0, P = 0.86 Identities = 34/39 (87%), Positives = 34/39 (87%), Strand = Plus / Plus Query: 1186 TAAATAAATAAATAAAATAAATACAATGATAT-CGATAA 1223 |||||||||||||||| |||||| ||| |||| |||| | Sbjct: 56 TAAATAAATAAATAAA-TAAATA-AATAATATACGATCA 92 >NOT:C_75285-76131 Chromosome 3 from 75285 to 76131 Length = 847 Minus Strand HSPs: Score = 172 (31.9 bits), Expect = 2.2, P = 0.89 Identities = 212/395 (53%), Positives = 212/395 (53%), Strand = Minus / Plus Query: 1411 TTCTT-TGCTAAATATACGCTGACATGAATTATT--TT-TTAACTGTTTCTCCTCCAAAC 1356 |||| |||||| || || | ||| ||||| || ||||| || | | ||| Sbjct: 361 TTCTAATGCTAATTACACCTTAACAA-AATTAAAAATTCTTAAC-GTAGATTTTTAAAAA 418 Query: 1355 TTTCAAATAT-TCAAAT-TGAACTAA-ATGATAATTCTTGCGCTTCCTTTTTTGAAAAAG 1299 ||| | || ||| | | || || |||| | ||| | | ||| Sbjct: 419 AGGCAAGAAGATCGTTCCTGATGCACGACGAAAACGGTTGCACC-CCTACTAAGGCAAAA 477 Query: 1298 TAGATATATGTATCAT-AAAGAAAACGTTATTGTTATTTTCTTGGGCAACAAAAATCCAT 1240 | | ||||| || ||| |||| | || | || || | ||||||| || Sbjct: 478 TTGC-ATATGCGG-ATGAAATCAAACCTC-TTCTG-TTGCATTAAG-AACAAAAGGAAAT 532 Query: 1239 GAAAAGAATTTCACCGT-TATCGATATCA-TTGTATTTATTTTATTTATTTATTTAANNN 1182 | | |||| ||| || ||| || ||||| | | | | || | | Sbjct: 533 CATTTTTCTCTCACTTCATATT-ATTTCACTTATATTT-TCCTCTCCACTTCCATCACGC 590 Query: 1181 NNNNNNNNNNNNNNNNNNNNNGATTTATATC-CTGCAAACAACACTTCGAATTTAAATCG 1123 ||| | || || || | | ||| ||||| |||| Sbjct: 591 AATCGTTAGTGCTTTTTATTTTTTTTCT-TCGCT-CATAAAGGACTA-GAATTAAAATGA 647 Query: 1122 ATATT-TC-ATAAGTTACAACTAA-CACTTA-TAGAAA-CAGAAGTATGAGTACTTATCA 1068 | || || || | ||||| || | ||| || ||| |||||||| | | || | Sbjct: 648 AAATCGTCTATCA-TTACACGTATGCTATTACTACAAAACAGAAGTACAAAAATGAATAA 706 Query: 1067 TTAACGAGGAA--AAATGCCCTATTTTGTTTAGCA 1035 || | ||| |||||| | |||| |||| || Sbjct: 707 ATATAAAAGAAGTAAATGCTTT-TTTT-TTTAACA 739 >NOT:Q_43647-46723 Chromosome Mito from 43647 to 46723 Length = 3077 Minus Strand HSPs: Score = 174 (32.2 bits), Expect = 2.5, P = 0.92 Identities = 128/222 (57%), Positives = 128/222 (57%), Strand = Minus / Plus Query: 1403 TAAATATACGCTGACATGAATTATTTTTTAACTGTT-TCTCCTCCAAACTTTCAAATATT 1345 |||| || | || | ||||| || || || | | | | | || | ||| | Sbjct: 2084 TAAACTTAATTAAATATTATATATTTATTTACAATTATATA-TATATA-TTACTCATAAT 2141 Query: 1344 CAAATTGAACTAA-ATGATAATTCT-TGCGCTTCCTTTTT-TGAAAAAGTAGATATATGT 1288 ||||| || ||| ||| ||||| | || || || | | | | | |||| ||| Sbjct: 2142 TAAATTAAATTAAGATGC-AATTCAATACGGTTGTATTATATTATTCATCAAATAT-TGT 2199 Query: 1287 ATCATAAAGAAAACGTTATTGTTATTTTCTTGGGCAACAAAAATCCATGAAAAGAATTTC 1228 | ||| || | | | | ||||| | | | || || | | ||| Sbjct: 2200 -TAATATTGATACCTACAGAGATATTTAATATTTTTATTATTATT-ATCCATT-ACTTTT 2256 Query: 1227 ACCGTTATCGATATCATTGTATTTATTTTATTTATTTATTTA 1186 |||| || | | | ||||||||| ||||||||||||| Sbjct: 2257 TTTATTAT--ATTTTAAT-TATTTATTT-ATTTATTTATTTA 2294 Score = 167 (31.1 bits), Expect = 5.3, P = 0.995 Identities = 243/430 (56%), Positives = 243/430 (56%), Strand = Minus / Plus Query: 1132 ATTTAA-ATCGA-TATTTCATAAGTTACAACTA-ACAC-TT-ATA-GAAACAGAAGTATG 1079 |||||| || | ||||| ||| ||| ||| | | || ||| |||| | || || Sbjct: 1810 ATTTAATATTTAATATTTAATATTTTATT-CTATAGATATTCATATGAAAAATAA-TA-- 1865 Query: 1078 AGTACTTATCATTAACGAGGAAAAATGCCCTATTTTGTTTAGCAATTAATGAACCATCGC 1019 |||| ||| |||| || | ||| | |||| |||| |||| || | Sbjct: 1866 AGTA--TATAATTAT-GATAATGAATATA-T-TTTTATTTAT-AATTTATTATTATAAAA 1919 Query: 1018 CAATTTTTGCTT--TAACAATTATTGC-CATTTTCAGCAGTACTAACGTAAGA-TCTAGT 963 ||||| || ||| ||| || |||| | | | | || ||||| | || Sbjct: 1920 ATATTTTAATTTAATAATAATAATAAATCATTAT-ATTAATTCTTT--TAAGAATTTATA 1976 Query: 962 GTGGT--TCGCTTAGGATGTTTT--TGAGTAGAAATC-TGCTGTGCATGCCATACGCAGT 908 | || | ||| || | | | | || || | | || ||| | || | Sbjct: 1977 ATTGTCATTATTTATTATATACTCCTTATTAAAAGGGATTCGGTTTCCCTCATCCTCA-T 2035 Query: 907 ACTTGAAACTTGAAATAATGGTGATAATTAGTTATTTAA-AGTA-TGT--TAATCCTCCT 852 | | | | | | | ||||||||| || | ||| | || | ||| | | | Sbjct: 2036 GGGT-ATCCCTCAC-TCCTTCTGATAATTAATTTTATAATAATAATAAAATAAACTTAAT 2093 Query: 851 TGT-TCTTTTATATTTATTTCGAATTCTTTTGCACTAGTATTAAAAATA-TCAGCAGAGA 794 | | || ||||||||||| |||| | | | || ||||| ||| | | | | Sbjct: 2094 TAAATATTATATATTTATTTACAATTATATAT-A-TA-TATTACTCATAATTAAATTAAA 2150 Query: 793 CGTAAAAGTGCAC--CAAAATTATTGTAAAACTACTTGCCCT-AAA-ATTGATACT--TC 740 ||| | |||| ||| | ||||| | || | | | ||| |||| || | | Sbjct: 2151 T-TAAGA-TGCAATTCAATACGGTTGTATTA-TATTATTCATCAAATATTGTTAATATTG 2207 Query: 739 ATACTCGACA 730 |||| | ||| Sbjct: 2208 ATAC-CTACA 2216 >NOT:Q_62447-63862 Chromosome Mito from 62447 to 63862 Length = 1416 Minus Strand HSPs: Score = 172 (31.9 bits), Expect = 2.7, P = 0.93 Identities = 210/398 (52%), Positives = 210/398 (52%), Strand = Minus / Plus Query: 1448 ATAAAATTCGCGTTCTTTTTACGTATCTGTGTATCTTTTCTTTGCTAA--ATATACGCTG 1391 || | ||| || ||||| || ||| ||| || | ||| ||| || | | Sbjct: 1024 ATTATATTATTATTTTTTTTTA-TAGATGT-TATATTATTTTTTATAATAATTTTTTTTT 1081 Query: 1390 ACATGAATTATTTTT-TAACTGTTTCTCCTCCAAACTTTCAAATA-TTCAAAT-TGAACT 1334 | | ||| | ||| ||||| |||| ||| | || ||| | || | Sbjct: 1082 ATTTAAATAAAATTTATAACTCCTTCTTAATTAAAGATAAAAGGGGTTCCCCCCTTAAGT 1141 Query: 1333 AAATG-ATAATTCTTGCGCTTCCTTTTTTGAAAAAGTAGATATATGTATCATAAAGAAAA 1275 | | | |||| | | | | | | | | ||||| | ||| | |||| | || Sbjct: 1142 ATAAGTATAAGTATAA-GTATAAGTATAAGTATAAGTATAAGTATAAGT-ATAAGTATAA 1199 Query: 1274 CGTTATTGT-TATTTTCTTGGGCAACAAAAATCCAT-GAAAAGA-ATTTCACCGTTATCG 1218 || || || || ||| | | ||| | | || || | | |||| Sbjct: 1200 -GT-ATAGTATACGGGGGGGGGGTCCCTCACTCCTTCGTTAATTTATAT-ATA-TTATTA 1255 Query: 1217 ATA-TCATTGTATTTATTTTATTTATTTATTTAANNNNNNNNNNNNNNNNNNNNNNNNGA 1159 ||| | ||| |||| | |||||||||||| || | Sbjct: 1256 ATAATTATTTAATTTTTATTATTTATTTATATA-TAAAAATATTCTAAAATTATTAAT-A 1313 Query: 1158 TTTATATCCTGCAAACAACACTTCGAATT-TAA--ATCGATATTTCATAAGTTACAACTA 1102 |||||| | | | || | | || | ||| || ||| || || | ||| || || Sbjct: 1314 TTTATAATA-GAATA-AATATTATAAAGTATAATTATAAATAATTAATTATTTA-AA-TA 1369 Query: 1101 ACACTTATAGAAACAGAAGTATG-AGTACTTATCATTA 1065 | | | ||| | | | ||| | || ||| |||| Sbjct: 1370 ATAATAATATATTTATTATTATATAATAAATAT-ATTA 1406 >NOT:C_40724-42165 Chromosome 3 from 40724 to 42165 Length = 1442 Minus Strand HSPs: Score = 171 (31.7 bits), Expect = 3.0, P = 0.95 Identities = 117/192 (60%), Positives = 117/192 (60%), Strand = Minus / Plus Query: 550 AACGGGAA-CGAAGTGTTAAACTT-AGATGCGGTTGACTTAAGCTT-TAAAA-GAGGAAA 495 || ||||| || | | || ||| || | | | | ||| | || | || || Sbjct: 517 AAGGGGAAACGTAA-GATACCCTTTAGG-GAAGATAAGGGAAGTTAGTAGATTGACGACG 574 Query: 494 ATAATGACTGATGATAAGAATTCAACAACGATTCAAAGC-AGGT--GAATTTCCATTACG 438 ||| |||||| | ||| || || |||| | | | | ||| | ||| || Sbjct: 575 TAAATCTGTGATGAGATGAAAAAAA-AA-GATTAGCATCTATATAAGAAAGTACATAACC 632 Query: 437 TTTCGCTTTTCAATTGAAAAAAATTTGGTGGTTATTCGTTTCTTGCTTGACCTCTTTACT 378 | | | ||| | |||||||||||||| || || || | || ||| ||||||| || Sbjct: 633 T--C-CATTTAAGTTGAAAAAAATTTGTATGTAAT--GTCTTTT-CTT--CCTCTTTTCT 684 Query: 377 TTTTATACTTCT 366 || | | |||| Sbjct: 685 TTATTTCATTCT 696 >NOT:Q_64670-65770 Chromosome Mito from 64670 to 65770 Length = 1101 Plus Strand HSPs: Score = 169 (31.4 bits), Expect = 3.5, P = 0.97 Identities = 197/371 (53%), Positives = 197/371 (53%), Strand = Plus / Plus Query: 858 ATTAACATACTTTAAATAACTAATTATCACCATTATTTCAAGTTTCAAGTACTGCGTATG 917 || | ||| | || | | || || | | ||| ||| ||| | || | ||| Sbjct: 8 ATAATAATAATATATTTTATTA-TTCTTAA-ATTTTTTATTCTTTATATTA-TATATATA 64 Query: 918 GCATGCACAGCAG-A-TTTCTACTCA-AAAACATCCTAAGCGAACCACACTAGATCT-TA 973 || | | | | ||| || | | |||| || ||| | | | || || | || Sbjct: 65 ATATTAATATTATTACTTTTTAATAACAAAATATTATAATTAATTGATA-TATATATATA 123 Query: 974 CGTTAGTACTGCTGAAAATGGCAATAATTGTTAAAGCAAAAATTGGCGATGGTTCATTAA 1033 | | || | | || || | ||| | |||| ||| ||| | | || ||||| Sbjct: 124 CCAAA-TA-TAATTAAT-TGAAATTAAATAATAAATAAAATATTTACT-TCTTT-ATTAA 178 Query: 1034 T-TGCTAAACAAAATAGGGCATTTTTCCTCGTTAATGATAAGTACTCATA-CTTCTGTTT 1091 | |||| || | | ||||| | || | | || | ||| ||| | | Sbjct: 179 AATTCTAATTAATTGATT-C-TTTTTATTGAATATTAAATTCTATT-ATAACTTATTAAT 235 Query: 1092 CTAT-AAGTG-TTAGTTGTAACTTATGA-AATATCGATT-TAAATTCG-AAGTGTTGTTT 1146 || || | ||| || ||| | || | ||||| ||| | |||| || | || || Sbjct: 236 TAATTAATTAATTAATTATAA-TAATAATAATATTTATTATTAATTATTAAATATTTATT 294 Query: 1147 GCAGGATATAAATCNNNNNNNNNNNNNNNNNNNNNNNNTTAAATAAATAAATAAAATAAA 1206 | ||||| | ||| || |||||||||||| Sbjct: 295 --ATTATATATAAGATTTAATTTTAAATATTAATAAAA--AAAGAATAAAATAAAATAAA 350 Query: 1207 TACAATGATAT 1217 ||| |||| Sbjct: 351 ATGAATAATAT 361 Minus Strand HSPs: Score = 161 (30.2 bits), Expect = 8.2, P = 0.9997 Identities = 279/529 (52%), Positives = 279/529 (52%), Strand = Minus / Plus Query: 1312 CTTTTTTGAAAAAGTAGATATATGTATCATAAAGAAAACGTT-ATTGTTATTTTCTTGGG 1254 || ||| | | || ||||| ||| ||| || | || || || ||| || Sbjct: 432 CTATTTATTATTA-TA-ATATAA-TATT-TAATCAATAGATTTATAATTTATTTAATGAA 487 Query: 1253 CAACA-A-AAATCCATGAAAAGAATTTCACCGTTATCGATATCATTGTAT--TTATTTTA 1198 | | |||| || |||| |||| | |||| ||| | | | | |||||| | Sbjct: 488 TATTTTATAAATATAT-AAAACAATTCCTTT-TTATTATTATAAATTTTTCATTATTT-A 544 Query: 1197 TTTATTTATTTAANNNNNNNNNNNNNNNNNNNNNNNNGATTTATATCCTGCAAAC-AACA 1139 |||||||||||| ||| ||| | | || | Sbjct: 545 TTTATTTATTTATTTATTTATTCAATATATAAAAATA-ATT-ATAAAAAGATTATTAAAA 602 Query: 1138 CTTCGAATTTAAATCGATATTTCATAAGTTACAACTAACACTTATAGAAACAG-AAGTAT 1080 | ||||||| | |||| | ||| ||| | || | | ||| ||| | || ||| Sbjct: 603 ATAATAATTTAA-T-GATAAAT-ATATATTATATATATTAAT-ATAAAAATAATAAATAT 658 Query: 1079 GAGTACTTATCAT-TAACGAGGA-A-AAATGCCCTATTT-TGTTTAGCA-ATTAATGAAC 1025 | || | || || ||| | | | |||| ||| | | | || | | ||||| Sbjct: 659 AAATA-T-ATTATGTAAATATTATATAAATTTG-TATATGTATATATTATAATAATGTTA 715 Query: 1024 CATCGCCAATTTTTGCTTTAACAATTAT-TGCCATTTTCAGC-AGTACTAACG-TAAGAT 968 || ||| | | || ||| | || |||| | | | ||| ||| || Sbjct: 716 TATAAGTAATAATATAATAAAATATTTTATGTAATTTATATATATTTATAATTATAAAAT 775 Query: 967 CTAGTGTGGTTCGCTTAGGATGTTTTTGAGTAGAAATC-TGCTGTGCATGCCATACGCAG 909 | | | || || || | || ||| | | | || ||| Sbjct: 776 AAAAA-TATTATAAATA--ATAAAATTAA-TAATAATAATAATTTTAATAAAATAAATTA 831 Query: 908 TACTTGAAACTTGAAATAATGGTGATAATTAGTTATT-TAAAGTATGTTAATCCTCCTTG 850 || | || || | || || | | || | ||| | |||| ||| || |||| || Sbjct: 832 TATATTTAATTTTAT-TA-TGAAGTTTAT-ACTTAATATAAATTATATT--TCCT--TTA 884 Query: 849 TTCTTTTATATTTATTTCGAATTCTTTTGCACTAGTATTAAAAATATCA 801 | || || | || || || || | || || |||||||| | Sbjct: 885 TAAATTATTAAT-ATATCCTTTTTAATTAAA-TAAAAT-AAAAATATTA 930 >NOT:P_264191-264601 Chromosome 16 from 264191 to 264601 Length = 411 Plus Strand HSPs: Score = 157 (29.6 bits), Expect = 5.6, P = 0.996 Identities = 59/86 (68%), Positives = 59/86 (68%), Strand = Plus / Plus Query: 459 TTGAATCGTTGTTGAATTCTTATCATCAGTCATTATTTTCCTCTTTTAAAGCTTAAGTCA 518 |||| | ||||| || || ||| | ||| |||| || |||||||||||||||| | Sbjct: 8 TTGA-T-GTTGTGTAACACT-ATCTTTTCTCACTATTCTC-TCTTTTAAAGCTTAAGAAA 63 Query: 519 ACCGCATCTAAGTTTAACACTTCGTT 544 | || || | | || | || ||| Sbjct: 64 ATCGAATGCATATACAAAA-TTAGTT 88 Parameters: E=10 B=100 V=100 filter=dust ctxfactor=2.00 Q=10 R=10 Query ----- As Used ----- ----- Computed ---- Strand MatID Matrix name Lambda K H Lambda K H +1 0 +5,-4 0.192 0.182 0.357 same same same Q=10,R=10 0.104 0.0151 0.0600 n/a n/a n/a -1 0 +5,-4 0.192 0.182 0.357 same same same Q=10,R=10 0.104 0.0151 0.0600 n/a n/a n/a Query Strand MatID Length Eff.Length E S W T X E2 S2 +1 0 1448 1412 10. 156 11 n/a 73 0.021 83 134 0.023 124 -1 0 1448 1412 10. 156 11 n/a 73 0.021 83 134 0.023 124 Statistics: Database: intergenic Title: intergenic.fna Posted: 3:48:20 PM EST Nov 10, 2004 Created: 3:48:20 PM EST Nov 10, 2004 Format: XDF-1 # of letters in database: 3,015,920 # of sequences in database: 6414 # of database sequences satisfying E: 28 No. of states in DFA: 255 (255 KB) Total size of DFA: 319 KB (2081 KB) Time to generate neighborhood: 0.02u 0.05s 0.07t Elapsed: 00:00:00 No. of threads or processors used: 4 Search cpu time: 0.23u 0.06s 0.29t Elapsed: 00:00:00 Total cpu time: 0.28u 0.11s 0.39t Elapsed: 00:00:00 Start: Wed Jan 12 11:12:09 2005 End: Wed Jan 12 11:12:09 2005 EXIT CODE 0 BLASTN 2.0MP-WashU [08-Nov-2004] [sol8-sparc-ILP32F64 2004-11-08T14:57:24] Copyright (C) 1996-2004 Washington University, Saint Louis, Missouri USA. All Rights Reserved. Reference: Gish, W. (1996-2004) http://blast.wustl.edu Notice: this program and its default parameter settings are optimized to find nearly identical sequences rapidly. To identify weak protein similarities encoded in nucleic acid, use BLASTX, TBLASTN or TBLASTX. Query= seq2 (1321 letters; record 2) Database: intergenic.fna 6414 sequences; 3,015,920 total letters. Searching....10....20....30....40....50....60....70....80....90....100% done Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N NOT:A_196179-201460 Chromosome 1 from 196179 to 201460 6528 3.2e-292 1 NOT:B_153613-153851 Chromosome 2 from 153613 to 153851 138 0.38 1 NOT:Q_27812-28487 Chromosome Mito from 27812 to 28487 178 0.59 1 >NOT:A_196179-201460 Chromosome 1 from 196179 to 201460 Length = 5282 Plus Strand HSPs: Score = 6528 (985.5 bits), Expect = 3.2e-292, P = 3.2e-292 Identities = 1310/1321 (99%), Positives = 1310/1321 (99%), Strand = Plus / Plus Query: 1 AGCTGTGCAATGTAGTCACAATAACACTCGTTCATTTGTATCCATTGCGAATGCCGGTAC 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 AGCTGTGCAATGTAGTCACAATAACACTCGTTCATTTGTATCCATTGCGAATGCCGGTAC 60 Query: 61 ATCGGAAAACAGGATAGGACCTATTTAATTATATAGTATGAAGTATTCATAACTTCTTGA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ATCGGAAAACAGGATAGGACCTATTTAATTATATAGTATGAAGTATTCATAACTTCTTGA 120 Query: 121 GGCATCAATACATCATATTCCATGAGCTGCGTGGCATTCATACTCATTGATTTAAAGGTT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 GGCATCAATACATCATATTCCATGAGCTGCGTGGCATTCATACTCATTGATTTAAAGGTT 180 Query: 181 TTTTATTTTCATGGAAAAGATTAACCGGGCTGAACGAAATATATTAAAGATGCTAAAACT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 TTTTATTTTCATGGAAAAGATTAACCGGGCTGAACGAAATATATTAAAGATGCTAAAACT 240 Query: 241 TATGCTTTCATTGACTTTCAATAGTGTCCACTAACCNNNNNNNNNNNCTACTCTAACAAG 300 |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 241 TATGCTTTCATTGACTTTCAATAGTGTCCACTAACCAAAAAAAAAAACTACTCTAACAAG 300 Query: 301 GGATCCCCATGGATTCAAAGCCGATACCAAACAGATATTACTCTGCATAGAATTCAAAAT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 GGATCCCCATGGATTCAAAGCCGATACCAAACAGATATTACTCTGCATAGAATTCAAAAT 360 Query: 361 ATTATCCATATAAAGATGGGAAAGAATTCCAAAAGGAAAATTCTGCTCTAGAAGGTCACA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ATTATCCATATAAAGATGGGAAAGAATTCCAAAAGGAAAATTCTGCTCTAGAAGGTCACA 420 Query: 421 AAACTAGTAAGAAGTTGACCCCCCTGCCATTAAAAAACGTTTTTAACAGCTCTAGCAATA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 AAACTAGTAAGAAGTTGACCCCCCTGCCATTAAAAAACGTTTTTAACAGCTCTAGCAATA 480 Query: 481 TTCTAATTTCGAAAGTGCTCTCAAAAGAATTTATTCATTTGCGAAAAAAAGAATATCTCA 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 TTCTAATTTCGAAAGTGCTCTCAAAAGAATTTATTCATTTGCGAAAAAAAGAATATCTCA 540 Query: 541 AAATTTTCTCGATCACGTACAACATCGTAGTATTTAAAGGATTATTAAGTCAACGAATAA 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 AAATTTTCTCGATCACGTACAACATCGTAGTATTTAAAGGATTATTAAGTCAACGAATAA 600 Query: 601 TTTCCACAAGAAAGGTACCTCTAGTTTTGGTGATGAAGCAAGACAATAACTGGCAAGGGC 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 TTTCCACAAGAAAGGTACCTCTAGTTTTGGTGATGAAGCAAGACAATAACTGGCAAGGGC 660 Query: 661 TCTCACTAAATATCAACCCCTTTCAAATAAAAAAAGGATCATGGCTGGCAGCGCCCACAA 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 661 TCTCACTAAATATCAACCCCTTTCAAATAAAAAAAGGATCATGGCTGGCAGCGCCCACAA 720 Query: 721 CAATTAAACTCTGTTACTATCAAAAAACATTGAGCCCAAGAATGGAATAAAATTTTCACT 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 721 CAATTAAACTCTGTTACTATCAAAAAACATTGAGCCCAAGAATGGAATAAAATTTTCACT 780 Query: 781 ACACCTCGGACATGGATTTGTACATGTCCTATTATCCTGTAATTTTGACATATACTGATA 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 781 ACACCTCGGACATGGATTTGTACATGTCCTATTATCCTGTAATTTTGACATATACTGATA 840 Query: 841 TGGACCTCTTGTTTCGTATAAATCGCTATTTATTTCCCCAGATAACTAAAGAAAATCCTT 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 TGGACCTCTTGTTTCGTATAAATCGCTATTTATTTCCCCAGATAACTAAAGAAAATCCTT 900 Query: 901 CAACCCAGCGTTCTATATTACTATATTCTCAACCCGCCGTTTTCCTGCTGTGCGATAATT 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 901 CAACCCAGCGTTCTATATTACTATATTCTCAACCCGCCGTTTTCCTGCTGTGCGATAATT 960 Query: 961 CTCATTCAATACTACCATTTCAAACCTAGAAAAGGGTGTCTTTATTAAAACTGTAAGAAA 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 961 CTCATTCAATACTACCATTTCAAACCTAGAAAAGGGTGTCTTTATTAAAACTGTAAGAAA 1020 Query: 1021 ATTTTATCATGAACTCTGATGAAAAGTCTTCGGAAGATCAACTTTTTGATTTTTCAAAAA 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1021 ATTTTATCATGAACTCTGATGAAAAGTCTTCGGAAGATCAACTTTTTGATTTTTCAAAAA 1080 Query: 1081 TGAAAGAAACTGTTGTCTCCATTTATGGCCTCATATCTGAAGGAAATTCGTCTGCTATTA 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 TGAAAGAAACTGTTGTCTCCATTTATGGCCTCATATCTGAAGGAAATTCGTCTGCTATTA 1140 Query: 1141 GTCATACCACTATCTTCTTCTTGAAGCTGCATTTCAAGGTTGATTAGGAAGCATCTAACA 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 GTCATACCACTATCTTCTTCTTGAAGCTGCATTTCAAGGTTGATTAGGAAGCATCTAACA 1200 Query: 1201 ATCATTCGATAGGGAAAACAGAAAGGCCGTTACAGTTTTTTAAAAATATCAATATCAAGA 1260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1201 ATCATTCGATAGGGAAAACAGAAAGGCCGTTACAGTTTTTTAAAAATATCAATATCAAGA 1260 Query: 1261 GAAAGAACTAGGGATATTGCAAAATCAAAACTTCTGATATTTGGTTTTACGTGAAAATTA 1320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1261 GAAAGAACTAGGGATATTGCAAAATCAAAACTTCTGATATTTGGTTTTACGTGAAAATTA 1320 Query: 1321 C 1321 | Sbjct: 1321 C 1321 >NOT:B_153613-153851 Chromosome 2 from 153613 to 153851 Length = 239 Minus Strand HSPs: Score = 138 (26.8 bits), Expect = 0.48, P = 0.38 Identities = 86/141 (60%), Positives = 86/141 (60%), Strand = Minus / Plus Query: 1128 AATTT-CCTTCA-GATATGAGGCCATAAATGGAGACAACAGTT-TCTTTCATTTTTGAAA 1072 ||||| |||||| | | || | | ||| || | | || || |||| || ||| | Sbjct: 34 AATTTACCTTCAAGCTTTGTTGA-ACCAATTGACA-ATCAATTATCTTG-ATATTTTTAT 90 Query: 1071 AATCAAAAAGTTGATCT-TCCGAAG-ACTTT-TCATCAGAGT-T-CAT-GATAAAATTTT 1018 | |||| | | || | | ||| | | | || | || | || || || || Sbjct: 91 ATGCAAATATATTATGTATATGAAACAAAATGTTATATGTGTCTACAAAGAGCTCATATT 150 Query: 1017 CTTACAGTTTTAATAAAGACA 997 ||||||||||| ||||| | Sbjct: 151 ATTACAGTTTTAGAAAAGAGA 171 >NOT:Q_27812-28487 Chromosome Mito from 27812 to 28487 Length = 676 Minus Strand HSPs: Score = 178 (32.8 bits), Expect = 0.90, P = 0.59 Identities = 118/200 (59%), Positives = 118/200 (59%), Strand = Minus / Plus Query: 274 TTAGTGGACACTATTGAAAGTCAATGA-AAGCATAAGTTTTAGCATCTTTAATATATTTC 216 ||| | | | || | ||| | || | || |||| |||| || ||||||||||||| Sbjct: 70 TTATTTAATAATAATAAAA-TAAAAAATAATTATAA--TTTAATATATTTAATATATTTC 126 Query: 215 GTTCAGCCCGGTTAATCTTTTCCATGAAAATAAAAAACC-TTTAAATCAATG-AGT-ATG 159 || | | | || || | || | || ||| || ||||| | ||| | | ||| Sbjct: 127 CTTACGGACTATATAT-TTATATATATATATTAAATACAATTTAATTTAATTTAATTATG 185 Query: 158 A-ATGCCACGCAGCTCATGGAATATGATGTAT-TGATGCCTCAAGAAGTTATGAATACTT 101 || | | | | | |||| ||| || | || | | | ||| | || | Sbjct: 186 TTATTT-ATTAAA-TAAAGTTATATTATG-ATATAATAACAATATTATATATTATTATAT 242 Query: 100 CATACTA-TATAATTAAATA 82 || || |||| || |||| Sbjct: 243 AATTATAATATATTTTAATA 262 Parameters: E=10 B=100 V=100 filter=dust ctxfactor=2.00 Q=10 R=10 Query ----- As Used ----- ----- Computed ---- Strand MatID Matrix name Lambda K H Lambda K H +1 0 +5,-4 0.192 0.182 0.357 same same same Q=10,R=10 0.104 0.0151 0.0600 n/a n/a n/a -1 0 +5,-4 0.192 0.182 0.357 same same same Q=10,R=10 0.104 0.0151 0.0600 n/a n/a n/a Query Strand MatID Length Eff.Length E S W T X E2 S2 +1 0 1321 1310 10. 155 11 n/a 73 0.021 83 134 0.023 124 -1 0 1321 1310 10. 155 11 n/a 73 0.021 83 134 0.023 124 Statistics: Database: intergenic Title: intergenic.fna Posted: 3:48:20 PM EST Nov 10, 2004 Created: 3:48:20 PM EST Nov 10, 2004 Format: XDF-1 # of letters in database: 3,015,920 # of sequences in database: 6414 # of database sequences satisfying E: 3 No. of states in DFA: 254 (254 KB) Total size of DFA: 314 KB (2079 KB) Time to generate neighborhood: 0.04u 0.02s 0.06t Elapsed: 00:00:00 No. of threads or processors used: 4 Search cpu time: 0.14u 0.10s 0.24t Elapsed: 00:00:00 Total cpu time: 0.18u 0.12s 0.30t Elapsed: 00:00:00 Start: Wed Jan 12 11:12:09 2005 End: Wed Jan 12 11:12:09 2005 EXIT CODE 0 BLASTN 2.0MP-WashU [08-Nov-2004] [sol8-sparc-ILP32F64 2004-11-08T14:57:24] Copyright (C) 1996-2004 Washington University, Saint Louis, Missouri USA. All Rights Reserved. Reference: Gish, W. (1996-2004) http://blast.wustl.edu Notice: this program and its default parameter settings are optimized to find nearly identical sequences rapidly. To identify weak protein similarities encoded in nucleic acid, use BLASTX, TBLASTN or TBLASTX. Query= seq3 (1321 letters; record 3) Database: intergenic.fna 6414 sequences; 3,015,920 total letters. Searching....10....20....30....40....50....60....70....80....90....100% done Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N NOT:A_196179-201460 Chromosome 1 from 196179 to 201460 6493 1.2e-290 1 NOT:A_13744-21526 Chromosome 1 from 13744 to 21526 491 4.9e-15 1 >NOT:A_196179-201460 Chromosome 1 from 196179 to 201460 Length = 5282 Plus Strand HSPs: Score = 6493 (980.3 bits), Expect = 1.2e-290, P = 1.2e-290 Identities = 1305/1321 (98%), Positives = 1305/1321 (98%), Strand = Plus / Plus Query: 1 CCAACACTTAAACGTTAAAATTTCAAACTATCTACTGAAATATAAATTTTCAGTCAAAGA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1321 CCAACACTTAAACGTTAAAATTTCAAACTATCTACTGAAATATAAATTTTCAGTCAAAGA 1380 Query: 61 GATGAAACGATTATTTTCTTGAGTAATTCGTTGTCACAATTTAACAGAAAATTACTGTTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1381 GATGAAACGATTATTTTCTTGAGTAATTCGTTGTCACAATTTAACAGAAAATTACTGTTT 1440 Query: 121 TTTTCAAGTAGTTCACAAAGATACTCAAACTAAGATCATGGAGACGTCGGCAAGCAATTG 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1441 TTTTCAAGTAGTTCACAAAGATACTCAAACTAAGATCATGGAGACGTCGGCAAGCAATTG 1500 Query: 181 ATTGTTAGTGATTATCAAAACTCATTAGCTTCGGTAAAACTACATAGATTGAAAATCAGT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1501 ATTGTTAGTGATTATCAAAACTCATTAGCTTCGGTAAAACTACATAGATTGAAAATCAGT 1560 Query: 241 AGTAACATACAACATGGTTTCCATGAGATTACAAACCGGCCAACCTAATGCTTTCAAAAA 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1561 AGTAACATACAACATGGTTTCCATGAGATTACAAACCGGCCAACCTAATGCTTTCAAAAA 1620 Query: 301 TTCTTTGCTTACTGATTCACGGTGGCCAAGAAGCATATAAATCTGTACTTTGCAGTAAAA 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1621 TTCTTTGCTTACTGATTCACGGTGGCCAAGAAGCATATAAATCTGTACTTTGCAGTAAAA 1680 Query: 361 AACAGATGGTATTGCTCATTCCCAGCGATTGCCAAATACGATTCATAACAGATTGACTTA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1681 AACAGATGGTATTGCTCATTCCCAGCGATTGCCAAATACGATTCATAACAGATTGACTTA 1740 Query: 421 TCTTTTTCGAAAGCTCTATCATATGGCTTTGAGTAATAAGGTGAGATTTTTTTGGTGATG 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1741 TCTTTTTCGAAAGCTCTATCATATGGCTTTGAGTAATAAGGTGAGATTTTTTTGGTGATG 1800 Query: 481 AAAATAAATACGGTGCCTTGATGCAAAATTTTTAGCCACAAACCTCTCTTCAGTCCCACA 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1801 AAAATAAATACGGTGCCTTGATGCAAAATTTTTAGCCACAAACCTCTCTTCAGTCCCACA 1860 Query: 541 TGATTCACCTGATTACGACTCACTATTTCATCTGTTCCATAAATCTCGGCTTTTTATATA 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1861 TGATTCACCTGATTACGACTCACTATTTCATCTGTTCCATAAATCTCGGCTTTTTATATA 1920 Query: 601 CAGAACATTAGACGACGGGAAGAGAAAAACGTCAGTATAACCCACTTTTGTTCGTAAAAA 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1921 CAGAACATTAGACGACGGGAAGAGAAAAACGTCAGTATAACCCACTTTTGTTCGTAAAAA 1980 Query: 661 AAGGTTATTCACTTCTACTCCGTACTAATCAATGACTTTAATGGTGAAACCATGATGAGG 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1981 AAGGTTATTCACTTCTACTCCGTACTAATCAATGACTTTAATGGTGAAACCATGATGAGG 2040 Query: 721 AGAGTAACACGATGTAATTGTCATAAACTAATATTATCCCATATTAGTTTACTGACGGCT 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2041 AGAGTAACACGATGTAATTGTCATAAACTAATATTATCCCATATTAGTTTACTGACGGCT 2100 Query: 781 ACAAGTGAGAATATATACTTTAAGAGTGTAACCATACCAGTAATTGGGTTCCAAACAAGT 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2101 ACAAGTGAGAATATATACTTTAAGAGTGTAACCATACCAGTAATTGGGTTCCAAACAAGT 2160 Query: 841 TTGTGAGGCGCGTGTGCTGAAAGTNNNNNNNNCTTACCTTAATAACGCAATTTCTGGCGA 900 |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 2161 TTGTGAGGCGCGTGTGCTGAAAGTAAAAAAAACTTACCTTAATAACGCAATTTCTGGCGA 2220 Query: 901 GGTTAAAATATTAAATATAAAAAGCCTTCCAAGTAATTTTGCCCACTAAAATGTAACACA 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2221 GGTTAAAATATTAAATATAAAAAGCCTTCCAAGTAATTTTGCCCACTAAAATGTAACACA 2280 Query: 961 AAGCTCCACTGGTTCTCGGCTTCTTGTTCTTTCAAAAGGATCTTCAAATCCGCTTCCACT 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2281 AAGCTCCACTGGTTCTCGGCTTCTTGTTCTTTCAAAAGGATCTTCAAATCCGCTTCCACT 2340 Query: 1021 TAAGCAGCCTTCTGCTACGACTTCTTCTGAGACACTCGGTTTCGCGCGGGCACTTCTGCC 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2341 TAAGCAGCCTTCTGCTACGACTTCTTCTGAGACACTCGGTTTCGCGCGGGCACTTCTGCC 2400 Query: 1081 CACCAAAAAAGTTTATTTTCCGGAAAGCTTATTTCTAAATAAACTTCTGAGGAANNNNNN 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2401 CACCAAAAAAGTTTATTTTCCGGAAAGCTTATTTCTAAATAAACTTCTGAGGAATTTTTT 2460 Query: 1141 NNCCGCAAATTTCCATGCAACGTCGAACTCTCAAATTCTCACGAGATTATTTGACTTGCT 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2461 TTCCGCAAATTTCCATGCAACGTCGAACTCTCAAATTCTCACGAGATTATTTGACTTGCT 2520 Query: 1201 TTCCTTTCCCCCTTTTTCCACGCACTACGTCAATGCAAGTGATCCGCTTTTGAAGAAGCA 1260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2521 TTCCTTTCCCCCTTTTTCCACGCACTACGTCAATGCAAGTGATCCGCTTTTGAAGAAGCA 2580 Query: 1261 AAAAATACTTCTTTCAGCTCGTACCGGCATTTTTATTATTTGTCAAAACTGGCGTTTGGA 1320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2581 AAAAATACTTCTTTCAGCTCGTACCGGCATTTTTATTATTTGTCAAAACTGGCGTTTGGA 2640 Query: 1321 A 1321 | Sbjct: 2641 A 2641 Minus Strand HSPs: Score = 216 (38.5 bits), Expect = 0.028, P = 0.027 Identities = 144/246 (58%), Positives = 144/246 (58%), Strand = Minus / Plus Query: 826 CAATTACTGGTATGGTTACACTCTTAAAGTATATATTCTCACT-TGTAGCCGTCAGTAAA 768 |||| ||| ||||| | || | | | | | | | ||| |||| |||| |||| Sbjct: 2010 CAATGACTTTAATGGTGAAAC-CATGATGAGGAGAGTAACACGATGTAATTGTCA-TAAA 2067 Query: 767 CTAATATGGGATAATATTAGTTTA-TGACAATTACATCGTGTTACTCTCCTCATCATG-G 710 ||||||| ||||||||||| |||| |||| ||| | | | | | | | | Sbjct: 2068 CTAATATTATCCCATATTAGTTTACTGACGGCTACAA-GTGAGAATATATACTTTAAGAG 2126 Query: 709 TTTCACCATTAAAGTCATTGATTAGTACGGAGTAGAA-GTGAATAACCTTTTTTTAC-G- 653 | | ||||| ||| |||| | | | | || |||| | | | | | | Sbjct: 2127 TGTAACCATACCAGTAATTGGGT--TCCAAACAAGTTTGTGAGGCGCGTGTGCTGAAAGT 2184 Query: 652 -AACAAAAGTGGGTTATACTGACGTTTTTCTCTTCCCGTCGTCTAATGTTCTGTATATAA 594 || |||| | | || | ||| || ||| | | || ||| | | |||||| Sbjct: 2185 AAAAAAAACTTACCT-TAATAACGCAATT-TCTGGC-GAGGT-TAAAATATTAAATATAA 2240 Query: 593 AAAGCC 588 |||||| Sbjct: 2241 AAAGCC 2246 >NOT:A_13744-21526 Chromosome 1 from 13744 to 21526 Length = 7783 Minus Strand HSPs: Score = 491 (79.7 bits), Expect = 4.9e-15, P = 4.9e-15 Identities = 277/456 (60%), Positives = 277/456 (60%), Strand = Minus / Plus Query: 1219 GGAAAAAGGGG-GAAAGGAAAGCAA-GTCAAATAATCTCGTGAGAATTTGAGAGTTC-GA 1163 ||||||| | | | ||| | | |||||| |||||||||||| | || || || Sbjct: 1046 GGAAAAATAGATGTCAA-AAATCGATGTCAAAAAATCTCGTGAGACCTCCGGAATTTTGA 1104 Query: 1162 CGTTGCATGGAAATTTGCGGNNNNNNNN---TTCCTCAGAAGTTTATTTAGAAATAAGCT 1106 || |||| | ||| | ||| || | | || | || | ||||||||| Sbjct: 1105 CGCTGCAAGTCAATCTACGGGAAAGAAGAAATTTTTTA-AACCTAATGCA-AAATAAGCT 1162 Query: 1105 TTCC--GGAAAATAAACTTTTTTGGTGGGCA--G-AAGTGCCCGCGCGAAACCGAGTGTC 1051 || | ||||||||| |||| | | | || ||| || ||| | | | Sbjct: 1163 TTTCTTGGAAAATAAGATTTTCGGCAATAAAAGGTAAATGCA-GCCAAAAATCAAAATAC 1221 Query: 1050 T-CAGAAGAAGTCGTAGCAGAAGGCTGCTTAAGTGGAAGCGGATTTGAAGATCCTTTTGA 992 | |||||||||||||||| || | ||||| ||| ||||||||||||||||||||||| | Sbjct: 1222 TTCAGAAGAAGTCGTAGC-GAGGACTGCT-AAGGGGAAGCGGATTTGAAGATCCTTTCCA 1279 Query: 991 -AAGAACAAGAAGCCGAGAACCAGT--GGAGCTTTGTGTTACATTTTAGTGGGCAAAATT 935 || || ||| |||||| || | || ||| || | | | |||||| | | |||| Sbjct: 1280 GAACAAGAAGGAGCCGA-AAGCTGTCAGGAACTGTTCCTGATTTTTTAG-GAAAACAATT 1337 Query: 934 ACTTGGAAGGCTTTT-TATATTTAATATTTTAACCTCGCCAGAAATTGC-GTTATT-AAG 878 | | || | || | || | | | ||| | | || |||||| |||| | || | || Sbjct: 1338 AATAGGTAT-CTCGTCTAGAGT-AGTATCTCGAGCTT-CCAGAAGTTGCAGATAATCAAA 1394 Query: 877 GTAAGNNNNNNNNAC-TTTCAGCACACG-CGCCTCACAAACTTGTTTGGAACCCAATTAC 820 | | | ||| | | | || | || || || | |||| Sbjct: 1395 ATCATTGTTTTATCCCTTTTTTTAGATTACAGCTTAGAAGA--GTAGAGAGCAAGTTTAC 1452 Query: 819 TGGTATGGTTACACTCTTAAAGTATATATTC-TCAC 785 || | |||| | ||| | || |||||| | || Sbjct: 1453 TGAAACGGTTCCTTGTTTACAATA-ATATTCCTAAC 1487 Parameters: E=10 B=100 V=100 filter=dust ctxfactor=2.00 Q=10 R=10 Query ----- As Used ----- ----- Computed ---- Strand MatID Matrix name Lambda K H Lambda K H +1 0 +5,-4 0.192 0.182 0.357 same same same Q=10,R=10 0.104 0.0151 0.0600 n/a n/a n/a -1 0 +5,-4 0.192 0.182 0.357 same same same Q=10,R=10 0.104 0.0151 0.0600 n/a n/a n/a Query Strand MatID Length Eff.Length E S W T X E2 S2 +1 0 1321 1305 10. 155 11 n/a 73 0.021 83 134 0.023 124 -1 0 1321 1305 10. 155 11 n/a 73 0.021 83 134 0.023 124 Statistics: Database: intergenic Title: intergenic.fna Posted: 3:48:20 PM EST Nov 10, 2004 Created: 3:48:20 PM EST Nov 10, 2004 Format: XDF-1 # of letters in database: 3,015,920 # of sequences in database: 6414 # of database sequences satisfying E: 2 No. of states in DFA: 254 (254 KB) Total size of DFA: 313 KB (2079 KB) Time to generate neighborhood: 0.03u 0.01s 0.04t Elapsed: 00:00:00 No. of threads or processors used: 4 Search cpu time: 0.13u 0.10s 0.23t Elapsed: 00:00:00 Total cpu time: 0.16u 0.11s 0.27t Elapsed: 00:00:00 Start: Wed Jan 12 11:12:09 2005 End: Wed Jan 12 11:12:09 2005 EXIT CODE 0 BLASTN 2.0MP-WashU [08-Nov-2004] [sol8-sparc-ILP32F64 2004-11-08T14:57:24] Copyright (C) 1996-2004 Washington University, Saint Louis, Missouri USA. All Rights Reserved. Reference: Gish, W. (1996-2004) http://blast.wustl.edu Notice: this program and its default parameter settings are optimized to find nearly identical sequences rapidly. To identify weak protein similarities encoded in nucleic acid, use BLASTX, TBLASTN or TBLASTX. Query= seq4 (786 letters; record 4) Database: intergenic.fna 6414 sequences; 3,015,920 total letters. Searching....10....20....30....40....50....60....70....80....90....100% done Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N NOT:A_208654-209439 Chromosome 1 from 208654 to 209439 3853 1.4e-170 1 NOT:H_528618-530048 Chromosome 8 from 528618 to 530048 3714 1.5e-164 1 NOT:A_22687-24001 Chromosome 1 from 22687 to 24001 2982 1.9e-131 1 NOT:Q_31014-35373 Chromosome Mito from 31014 to 35373 208 0.027 1 NOT:O_421650-422668 Chromosome 15 from 421650 to 422668 192 0.11 1 NOT:D_99225-99562 Chromosome 4 from 99225 to 99562 155 0.85 1 NOT:C_40724-42165 Chromosome 3 from 40724 to 42165 167 0.87 1 >NOT:A_208654-209439 Chromosome 1 from 208654 to 209439 Length = 786 Plus Strand HSPs: Score = 3853 (584.2 bits), Expect = 1.4e-170, P = 1.4e-170 Identities = 775/786 (98%), Positives = 775/786 (98%), Strand = Plus / Plus Query: 1 AAAGTGCACCAAAATTATTGTAAAACTACTTGCCCTAAAATTGATACTTCATACTTGACA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 AAAGTGCACCAAAATTATTGTAAAACTACTTGCCCTAAAATTGATACTTCATACTTGACA 60 Query: 61 TATTCAAAAGGGGTCCAAGTATAGATGCATCNNNNNNNNNNNTTATCCGATGATGAGCAA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 61 TATTCAAAAGGGGTCCAAGTATAGATGCATCAAAAAAAAAAATTATCCGATGATGAGCAA 120 Query: 121 ATGGTAGCTTTTCGTTCCCAGGAAGTGTAGTAGTTCCATGAAGTCTAATGAGACTTTGGA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ATGGTAGCTTTTCGTTCCCAGGAAGTGTAGTAGTTCCATGAAGTCTAATGAGACTTTGGA 180 Query: 181 AAAAGGTTTGTCACGAGCACCTAACTATTGTATTTTGGAATTTTGATAAACTTCAAAACG 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 AAAAGGTTTGTCACGAGCACCTAACTATTGTATTTTGGAATTTTGATAAACTTCAAAACG 240 Query: 241 GGAACGAAGTGTTAAACTTAGATGCGGTTGATTTAAGCTTTAAAAGAGGAAAATAATGAC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 GGAACGAAGTGTTAAACTTAGATGCGGTTGATTTAAGCTTTAAAAGAGGAAAATAATGAC 300 Query: 301 TGATGATAAGAAGTCAACAACGATTCAAAGCAGGTGAATTTCCATTACGTTTCGCTTTTC 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 TGATGATAAGAAGTCAACAACGATTCAAAGCAGGTGAATTTCCATTACGTTTCGCTTTTC 360 Query: 361 AATTGAAAAAAATTTGGTGGTTATTCATTTCTTGCTTGACCTCTTTACTTTTTATACTTC 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 AATTGAAAAAAATTTGGTGGTTATTCATTTCTTGCTTGACCTCTTTACTTTTTATACTTC 420 Query: 421 TGTGATGAGAAGCAAGTTCGAGGATTTTACGATAAAGCCTACTGGTTATATTTGTATAAA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 TGTGATGAGAAGCAAGTTCGAGGATTTTACGATAAAGCCTACTGGTTATATTTGTATAAA 480 Query: 481 TTAGAACGTTGTCCTTATTTCTCTTTTCGAACAGTATCAAAATAAAGTTTTTGATTAGGG 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 TTAGAACGTTGTCCTTATTTCTCTTTTCGAACAGTATCAAAATAAAGTTTTTGATTAGGG 540 Query: 541 CCAGATTCTCTTCAAGGAAGAGATACCTCACGTCTGTAATATCTAAGAGCTAATGTTTCG 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 CCAGATTCTCTTCAAGGAAGAGATACCTCACGTCTGTAATATCTAAGAGCTAATGTTTCG 600 Query: 601 ATCGAACTTTCCTTTGCTTTTTTTCTGGATCTCATAATGTCCCACTGTATGTATGTGCCC 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 ATCGAACTTTCCTTTGCTTTTTTTCTGGATCTCATAATGTCCCACTGTATGTATGTGCCC 660 Query: 661 TCGCACAGCTTTGCTCATCATAGACATTAATCATTGGTTGTACGATAAAAATATCGCAAA 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 661 TCGCACAGCTTTGCTCATCATAGACATTAATCATTGGTTGTACGATAAAAATATCGCAAA 720 Query: 721 AATTATTCTAACGTTCAGATTAGATTCCGGCCATATTTCTGACATTTGTTTTATTAATAA 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 721 AATTATTCTAACGTTCAGATTAGATTCCGGCCATATTTCTGACATTTGTTTTATTAATAA 780 Query: 781 AAATTT 786 |||||| Sbjct: 781 AAATTT 786 >NOT:H_528618-530048 Chromosome 8 from 528618 to 530048 Length = 1431 Plus Strand HSPs: Score = 3714 (563.3 bits), Expect = 1.5e-164, P = 1.5e-164 Identities = 764/790 (96%), Positives = 764/790 (96%), Strand = Plus / Plus Query: 1 AAAGTGCACCAAAATTATTGTAAAACTACTTGCCCTAAAATTGATACTTCATACTTGACA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 642 AAAGTGCACCAAAATTATTGTAAAACTACTTGCCCTAAAATTGATACTTCATACTTGACA 701 Query: 61 TATTCAAAAGGGGTCCAAGTATAGATGCATCNNNNNNNNNNN---TTATCCGATGATGAG 117 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 702 TATTCAAAAGGGGTCCAAGTATAGATGCATCAAAAAAAAAAAAAATTATCCGATGATGAG 761 Query: 118 CAAATGGTAGCTTTTCGTTCCC-AGGAAGTGTAGTAGTTCCATGAAGTCTAATGAGACTT 176 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 762 CAAATGGTAGCTTTTCGTTCCCCAGGAAGTGTAGTAGTTCCATGAAGTCTAATGAGACTT 821 Query: 177 TGGAAAAAGGTTTGTCACGAGCACCTAACTATTGTATTTTGGAATTTTGATAAACTTCAA 236 ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 822 TGGAAAAAGGTTTGTCACGAGCACCGAACTACTGTATTTTGGAATTTTGATAAACTTCAA 881 Query: 237 AACGGGAACGAAGTGTTAAACTTAGATGCGGTTGATTTAAGCTTTAAAAGAGGAAAATAA 296 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 882 AACGGGAACGAAGTGTTAAACTTAGATGCGGTTGTTTTAAGCTTTAAAAGAGGAAAATAA 941 Query: 297 TGACTGATGATAAGAAGTCAACAACGATTCAAAGCAGGTGAATTTCCATTACGTTTCGCT 356 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 942 TGACTGGTGATAAGAAGTCAACAACGATTCAAAGCAGGTGAATTTCCATTACGTTTCGCT 1001 Query: 357 TTTCAATTGAAAAAAATTTGGTGGTTATTCATTTCTTGCTTGACCTCTTTACTTTTTATA 416 |||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||| Sbjct: 1002 TTTCAATTGAAAAAAATTTGGTGGTTATTCGTTTCTTGCTTGACCTCTTCATTTTTTATA 1061 Query: 417 CTTCTGTGATGAGAAGCAAGTTCGAGGATTTTACGATAAAGCCTACTGGTTATATTTGTA 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1062 CTTCTGTGATGAGAAGCAAGTTCGAGGATTTTACGATAAAGCCTACTGGTTATATTTGTA 1121 Query: 477 TAAATTAGAACGTTGTCCTTATTTCTCTTTTCGAACAGTATCAAAATAAAGTTTTTGATT 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1122 TAAATTAGAACGTTGTCCTTATTTCTCTTTTCGAACAGTATCAAAATAAAGTTTTTGATT 1181 Query: 537 AGGGCCAGATTCTCTTCAAGGAAGAGATACCTCACGTCTGTAATATCTAAGAGCTAATGT 596 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1182 AGGGCTAGATTCTCTTCAAGGAAGAGATACCTCACGTCTGTAATATCTAAGAGCTAATGT 1241 Query: 597 TTCGATCGAACTTTCCTTTGCTTTTTTTCTGGATCTCATAATGTCCCACTGTATGTATGT 656 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1242 TTCGATCGAACTTTCCTTTGCTTTTTTTCTGGATCTCATAATGTCCCACTGTATGTATGT 1301 Query: 657 GCCCTCGCACAGCTTTGCTCATCATAGACATTAATCATTGGTTGTACGATAAAAATATCG 716 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1302 GCCCTCGCACAGCTTTGCTCATCATAGACATTAATCATTGGTTGTATGATAAAAATATCG 1361 Query: 717 CAAAAATTATTCTAACGTTCAGATTAGATTCCGGCCATATTTCTGACATTTGTTTTATTA 776 ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1362 CAAGAATTATTCTAACGTTCAGATTAGATTCCAGCCATATTTCTGACATTTGTTTTATTA 1421 Query: 777 ATAAAAATTT 786 |||||||||| Sbjct: 1422 ATAAAAATTT 1431 >NOT:A_22687-24001 Chromosome 1 from 22687 to 24001 Length = 1315 Minus Strand HSPs: Score = 2982 (453.5 bits), Expect = 1.9e-131, P = 1.9e-131 Identities = 626/658 (95%), Positives = 626/658 (95%), Strand = Minus / Plus Query: 653 TACATACAGTGGGACATTATGAGATCCAGAAAAAAAGCAAAGGAAAGTTCGATCGAAACA 594 ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 TACATACAGTGGGACCTCATGAGATCCAGAAAAAAAGCAAAGGAAAGTTCGATCGAAACA 60 Query: 593 TTAGCTCTTAGATATTACAGACGTGAGGTATCTCTTCCTTGAAGAGAATCTGGCCCTAAT 534 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 61 TTAGCTCTTAGATATTACAGACGTGAGGTATCTCTTCCTTGAAGAGAATCTGGCCCTGAT 120 Query: 533 CAAAAACTTTATTTTGATACTGTTCGAAAAGAGAAATAAGGACAACGTTCTAATTTATAC 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 CAAAAACTTTATTTTGATACTGTTCGAAAAGAGAAATAAGGACAACGTTCTAATTTATAC 180 Query: 473 AAATATAACCAGTAGGCTTTATCGTAAAATCCTCGAACTTGCTTCTCATCACAGAAGTAT 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 AAATATAACCAGTAGGCTTTATCGTAAAATCCTCGAACTTGCTTCTCATCACAGAAGTAT 240 Query: 413 AAAAAGTAAAGAGGTCAAGCAAGAAATGAATAACCACCAAATTTTTTTCAATTGAAAAGC 354 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 241 AAAAAGTAAAGAGGTCAAGCAAGAAACGAATAACCACCAAATTTTTTTCAATTGAAAAGC 300 Query: 353 GAAACGTAATGGAAATTCACCTGCTTTGAATCGTTGTTGACTTCTTATCATCAGTCATTA 294 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 301 GAAACGTAATGGAAATTCACCTGCTTTGAATCGTTGTTGAATTCTTATCATCAGTCATTA 360 Query: 293 TTTTCCTCTTTTAAAGCTTAAATCAACCGCATCTAAGTTTAACACTTCGTTCCCGTTTTG 234 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 361 TTTTCCTCTTTTAAAGCTTAAGTCAACCGCATCTAAGTTTAACACTTCGTTCCCGTTTTG 420 Query: 233 AAGTTTATCAAAATTCCAAAATACAATAGTTAGGTGCTCGTGACAAACCTTTTTCCAAAG 174 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 421 AAGTTTATCAAAATTCCAAAATACAGTAGTTAGGTGCTCGTGACAAACCTTTTTCCAAAG 480 Query: 173 TCTCATTAGACTTCATGGAACTACTACACTTCCTGGGAACGAAAAGCTACCATTTGCTCA 114 | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 481 TGTCATTAGACTTCATGGAACTACTACACTTCTGGGGAACGAAAAGCTACCATTTGCTCA 540 Query: 113 TCATCGGATAANNNNNNNNNNN-----GATGCATCTATACTTGGACCCCTTTTGAATATG 59 |||| |||||| |||||||| | ||||||||||||||||||| | Sbjct: 541 TCATTGGATAATTTCTTTTTTTTTTTTGATGCATCCAAACTTGGACCCCTTTTGAAT--G 598 Query: 58 TCAAGTATGAAGTATCAATTTTAGGGCAAGTAGTTTTACAATAATTTTGGTGCACTTT 1 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 599 TCGAGTATGAAGTATCAATTTTAGGGCAAGTAGTTTTACAATAATTTTGGTGCACTTT 656 >NOT:Q_31014-35373 Chromosome Mito from 31014 to 35373 Length = 4360 Plus Strand HSPs: Score = 208 (37.3 bits), Expect = 0.028, P = 0.027 Identities = 332/617 (53%), Positives = 332/617 (53%), Strand = Plus / Plus Query: 196 AGCACCTAACTATTGT-ATTTTGGAATTTTGATAAACTTCAAAACGGGAACGAAGTG-TT 253 || || ||| || | | ||| | ||| | || | || |||| | | | | || Sbjct: 447 AGTACATAATTAATATTATTATA-AATAAT-ATTA--TTAAAAA-GAATATAATATAATT 501 Query: 254 AA-ACTTAGATGCGGTTGATTTAAGCTTTAAAAGAGGAAAATAATGACTGATGATAAGAA 312 || | ||| | | | ||| | |||| | ||||||| | | | |||| || Sbjct: 502 AATAGAAAGACGTTTTAAAAATAAAAATAAAAATA--AAAATAAAAA-TAAAAATAAAAA 558 Query: 313 GTCAACA-ACGATTCAAAGCAGGTGAA-TTTCCATTACGTTTCGCTTTTCAATTGAAAAA 370 | || | | | | |||| || | ||| ||| | | | ||||||||||| Sbjct: 559 -TAAAAATAAAAATAAAAG-AGTTTTGGTTTACATATCAAGACCCAATTCAATTGAAACT 616 Query: 371 AATTTGGTGGTTATTCATTTCTTGCTTGACCTCTTTACTTTTTATACTT-CTGTGATGAG 429 | ||| | ||| || || || |||| || || ||||| | | | | | | Sbjct: 617 A-TTTATTTATTAATCTCCTCCC-CTCCCCCTCACTA-TTATTATAAGTACAATTAGG-G 672 Query: 430 AAGCAAGTTCG-AG-GAT-TTTAC-GATAAA-GCCTACTGGTTATATTTGTATAAATTAG 484 ||| || || | | ||||| | ||| | || | || | || || || Sbjct: 673 CGCCAACCCCGCAGTGTTATTTACTGGGAAATGTTTA-TCCCAATTAATATAATAACGAG 731 Query: 485 AACG-TTG-TCCTTATTTCTCTTTTCGAACAGTATCAAAATAAAGTTTT-TGATTAGG-G 540 | || | |||||| | ||| | | | | || |||| || | | |||| | Sbjct: 732 AGTTATTAATTATTATTTATAAATTCATATAATGT-AATATAATGTAATGTAATTAATAG 790 Query: 541 C-CAG-ATTCTCTTCAAGGAAGAGATACCTCACGTCTGTAATATCTAAGAGCTAATGTTT 598 || ||| | || | | || | | | | | | | ||| | | | || || Sbjct: 791 AACATTATTGTGTT-ATTCACCAG-TGT-TAAGATATATTA-ATCCCA-ATTTTAT-TTA 844 Query: 599 CGATCGAACTTTCCTTTGCTTTTTTTCTGGATCTCATAATGTCCCACTGTA-TGTATGTG 657 | ||| || || || || || ||| |||| | | | || | ||| | Sbjct: 845 ATAGTGAAGATTATATTTTATTAATTATGAATC-CATATTATTATTATTTAATATATTTA 903 Query: 658 CCCTCGCACAGCTT-TGCTCATCATAGACA--TTA-ATCATTG--GTTGTACGATAAAAA 711 | | | | | | || ||| | | ||| || | ||| || | ||||| Sbjct: 904 TAATATTATATATAATTATAATTATAAATAATTTATATAAAAAAAGTTTTATTA-AAAAA 962 Query: 712 TATCGC-AAAAAT-TATTCT-AACGTTCAGATTAGATTCCGGCCATATTTCTGACATTTG 768 ||| |||||| || | | || | | || | | | ||| | | | | Sbjct: 963 TATTATTAAAAATATAATATTAATAATAA-ATAAAAATAATATTATACTCTTAATAGAAT 1021 Query: 769 TTTTATTAATAAAAATT 785 || || | ||||||||| Sbjct: 1022 TTATAATGATAAAAATT 1038 >NOT:O_421650-422668 Chromosome 15 from 421650 to 422668 Length = 1019 Minus Strand HSPs: Score = 192 (34.9 bits), Expect = 0.12, P = 0.11 Identities = 138/237 (58%), Positives = 138/237 (58%), Strand = Minus / Plus Query: 582 ATATTAC-AGACGTGAG-GTATCTCTTCCTTGAAGAGAATCTGGCCCTAATCAAAAACTT 525 ||||||| | || || ||| | |||||||||||| | | | ||||| | | | Sbjct: 3 ATATTACGAAACTTGGCTGTAGCACTTCCTTGAAGAACCTGTCTCACTAATTATTA-CGG 61 Query: 524 TATTTTGATACTGTTCGAAAAGAGAAATAAGGACAACGTTCTAATTTATACAAATATAAC 465 || | || |||| || || || || | ||| ||| || ||| | Sbjct: 62 GATGTCTTTA-TGTTGTAATAGGTTCATC--GATGAGGTTTGGTTTTTTATTGCCATAGC 118 Query: 464 CAGTAGGCTTTATCGTAAAATC-CTCGA-ACTTG-CTTCTCAT-CAC-AGAAGTATAAAA 410 | ||| ||| || | | |||| || | ||| |||| | | ||| | ||| Sbjct: 119 TGAAAATCTT-ATC-TAGATACTCTCGTTACCCGACTTATCATTCCCGAGACGCTCAAAT 176 Query: 409 AGTA-AAGAGGTCAAGCAAGAAATG-AATA-ACCACCAAATTTTTTTCAATTGAAAA 356 | || || | || ||| || | |||| ||| |||||| || | | |||| Sbjct: 177 A-TACAACCTGATGAGAAAGTAAGGTAATATACCTCCAAATGTTCAAGATTATAAAA 232 >NOT:D_99225-99562 Chromosome 4 from 99225 to 99562 Length = 338 Plus Strand HSPs: Score = 155 (29.3 bits), Expect = 1.9, P = 0.85 Identities = 59/85 (69%), Positives = 59/85 (69%), Strand = Plus / Plus Query: 697 GTTGTACGATAAAAATATCGCAAAAATTATTCTAACG--TTCAG-ATTAGATTCCGGCCA 753 |||| | | ||||| | | ||||||| | | | | ||||| | | ||| | | | Sbjct: 181 GTTGAAAAAAAAAAAAAATG-AAAAATTTTGGTGATGACTTCAGCAAAAAATTTCAGG-A 238 Query: 754 TATTTCTGACATTTGT-TTTATTAA 777 |||||||||||||| |||||||| Sbjct: 239 TATTTCTGACATTTCACTTTATTAA 263 >NOT:C_40724-42165 Chromosome 3 from 40724 to 42165 Length = 1442 Plus Strand HSPs: Score = 167 (31.1 bits), Expect = 2.0, P = 0.87 Identities = 115/190 (60%), Positives = 115/190 (60%), Strand = Plus / Plus Query: 237 AACGGGAA-CGAAGTGTTAAACTT-AGATGCGGTTGATTTAAGCTT-TAAAA-GAGGAAA 292 || ||||| || | | || ||| || | | | | ||| | || | || || Sbjct: 517 AAGGGGAAACGTAA-GATACCCTTTAGG-GAAGATAAGGGAAGTTAGTAGATTGACGACG 574 Query: 293 ATAATGACTGATGATAAGAAGTCAACAACGATTCAAAGC-AGGT--GAATTTCCATTACG 349 ||| |||||| | ||| || || |||| | | | | ||| | ||| || Sbjct: 575 TAAATCTGTGATGAGATGAAAAAAA-AA-GATTAGCATCTATATAAGAAAGTACATAACC 632 Query: 350 TTTCGCTTTTCAATTGAAAAAAATTTGGTGGTTAT-TCATTTCTTGCTTGACCTCTTTAC 408 | | | ||| | |||||||||||||| || || || |||||| || |||||| Sbjct: 633 T--C-CATTTAAGTTGAAAAAAATTTGTATGTAATGTCTTTTCTTCCTCTTT-TCTTTA- 687 Query: 409 TTTTTATACT 418 ||| || || Sbjct: 688 TTTC-ATTCT 696 Parameters: E=10 B=100 V=100 filter=dust ctxfactor=2.00 Q=10 R=10 Query ----- As Used ----- ----- Computed ---- Strand MatID Matrix name Lambda K H Lambda K H +1 0 +5,-4 0.192 0.182 0.357 same same same Q=10,R=10 0.104 0.0151 0.0600 n/a n/a n/a -1 0 +5,-4 0.192 0.182 0.357 same same same Q=10,R=10 0.104 0.0151 0.0600 n/a n/a n/a Query Strand MatID Length Eff.Length E S W T X E2 S2 +1 0 786 775 10. 148 11 n/a 73 0.023 81 134 0.023 121 -1 0 786 775 10. 148 11 n/a 73 0.023 81 134 0.023 121 Statistics: Database: intergenic Title: intergenic.fna Posted: 3:48:20 PM EST Nov 10, 2004 Created: 3:48:20 PM EST Nov 10, 2004 Format: XDF-1 # of letters in database: 3,015,920 # of sequences in database: 6414 # of database sequences satisfying E: 7 No. of states in DFA: 244 (244 KB) Total size of DFA: 280 KB (2067 KB) Time to generate neighborhood: 0.04u 0.02s 0.06t Elapsed: 00:00:00 No. of threads or processors used: 4 Search cpu time: 0.10u 0.10s 0.20t Elapsed: 00:00:00 Total cpu time: 0.15u 0.12s 0.27t Elapsed: 00:00:00 Start: Wed Jan 12 11:12:09 2005 End: Wed Jan 12 11:12:09 2005 EXIT CODE 0 BLASTN 2.0MP-WashU [08-Nov-2004] [sol8-sparc-ILP32F64 2004-11-08T14:57:24] Copyright (C) 1996-2004 Washington University, Saint Louis, Missouri USA. All Rights Reserved. Reference: Gish, W. (1996-2004) http://blast.wustl.edu Notice: this program and its default parameter settings are optimized to find nearly identical sequences rapidly. To identify weak protein similarities encoded in nucleic acid, use BLASTX, TBLASTN or TBLASTX. Query= seq5 (1477 letters; record 5) Database: intergenic.fna 6414 sequences; 3,015,920 total letters. Searching....10....20....30....40....50....60....70....80....90....100% done Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N NOT:A_209769-217148 Chromosome 1 from 209769 to 217148 7322 0. 1 NOT:H_530378-537758 Chromosome 8 from 530378 to 537758 7059 2.4e-316 1 NOT:A_13744-21526 Chromosome 1 from 13744 to 21526 2705 4.8e-118 1 NOT:A_21852-22232 Chromosome 1 from 21852 to 22232 1851 7.9e-80 1 NOT:O_522282-523027 Chromosome 15 from 522282 to 523027 200 0.096 1 >NOT:A_209769-217148 Chromosome 1 from 209769 to 217148 Length = 7380 Plus Strand HSPs: Score = 7322 (1104.6 bits), Expect = 0., P = 0. Identities = 1468/1477 (99%), Positives = 1468/1477 (99%), Strand = Plus / Plus Query: 1 AGTTAATGATTCACTGTGCTTTCTGTTGCTGTAGAATTTCTGAGGCATTGTCGCTCTCTT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 AGTTAATGATTCACTGTGCTTTCTGTTGCTGTAGAATTTCTGAGGCATTGTCGCTCTCTT 60 Query: 61 CTATGTGATGCTACAACGGAACTAGGCTTCTTATATATCGTGGTCCTACAAGATCTTGGT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 CTATGTGATGCTACAACGGAACTAGGCTTCTTATATATCGTGGTCCTACAAGATCTTGGT 120 Query: 121 ATCTCGTTTGCTTACTTTGAAGCTTCACTGATATATAGTATTTAAGCCACTTTCATGTTC 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ATCTCGTTTGCTTACTTTGAAGCTTCACTGATATATAGTATTTAAGCCACTTTCATGTTC 180 Query: 181 ATGGATAATCGTAATTGTACTACGCTGGTACCAGTTATGAACCCTATCAAATCATCATTG 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ATGGATAATCGTAATTGTACTACGCTGGTACCAGTTATGAACCCTATCAAATCATCATTG 240 Query: 241 AACACTGCTATTTTTAACTAATCAAGATGTGTATGCGGCGTACTTTATAATTTCACGACA 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 AACACTGCTATTTTTAACTAATCAAGATGTGTATGCGGCGTACTTTATAATTTCACGACA 300 Query: 301 CTATTGAAAGCAAACTAAAAATCAAGTAAATACCTATCCAAGTTGCGGGCTCTGGATTTA 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 CTATTGAAAGCAAACTAAAAATCAAGTAAATACCTATCCAAGTTGCGGGCTCTGGATTTA 360 Query: 361 TGTGGCCTTAAATTTTCGACCTATGGTTCGCTATTCAATATGAGAAAACCAAAATTAGGT 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 TGTGGCCTTAAATTTTCGACCTATGGTTCGCTATTCAATATGAGAAAACCAAAATTAGGT 420 Query: 421 ACAAGTACTGATTACGTCCGTGATTCGAAAAGCAGCGTTGAAAGATTACAAGATTTTGCG 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 ACAAGTACTGATTACGTCCGTGATTCGAAAAGCAGCGTTGAAAGATTACAAGATTTTGCG 480 Query: 481 TGTCCAGGCCGACACTTAACTTTAAGGTCTCGACTTAGTAACATGAGTTGCCAAAAGTTT 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 TGTCCAGGCCGACACTTAACTTTAAGGTCTCGACTTAGTAACATGAGTTGCCAAAAGTTT 540 Query: 541 TTTTCTCCTATCTGAATATGGGGAACCGGAATTTGTCTTTGACCTGACTTTCAAATTGTT 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 TTTTCTCCTATCTGAATATGGGGAACCGGAATTTGTCTTTGACCTGACTTTCAAATTGTT 600 Query: 601 GCATATGTNNNNNNNNNCAGAAGAAATATGATCTTCTTCTTCTAGCGATGCAAAAGGATT 660 |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 GCATATGTAAAAAAAAACAGAAGAAATATGATCTTCTTCTTCTAGCGATGCAAAAGGATT 660 Query: 661 CATTACAAATCGTCGCAAAGGCCGACAAGTTGCAGTATATTCACATTGCTTATTTGAAGT 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 661 CATTACAAATCGTCGCAAAGGCCGACAAGTTGCAGTATATTCACATTGCTTATTTGAAGT 720 Query: 721 ATGTTTGTATACACATCGATAGTATTCATTAACACCACAACTGCTGTGTATACTATGTCA 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 721 ATGTTTGTATACACATCGATAGTATTCATTAACACCACAACTGCTGTGTATACTATGTCA 780 Query: 781 AACAGCATAATAAAGCCCGTCATTTTTGTACCCGCTCATTTCCAATAGGCATCTAAACTT 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 781 AACAGCATAATAAAGCCCGTCATTTTTGTACCCGCTCATTTCCAATAGGCATCTAAACTT 840 Query: 841 ACAAATGTGGTACACTACTTCGAATTCATTAATCGATATTGAATGCTAAAAGTCTGCGAT 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 ACAAATGTGGTACACTACTTCGAATTCATTAATCGATATTGAATGCTAAAAGTCTGCGAT 900 Query: 901 TTCTTCCTCAACGTTCAAAAATCTCATCCAAGGCATAATCCCACATATTGAAGATCGCTA 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 901 TTCTTCCTCAACGTTCAAAAATCTCATCCAAGGCATAATCCCACATATTGAAGATCGCTA 960 Query: 961 CCAATTGTTACGGGCGAACTGAGGTTTTGGAAATGAGCTTGTACTTAGTAAATTTCTCTT 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 961 CCAATTGTTACGGGCGAACTGAGGTTTTGGAAATGAGCTTGTACTTAGTAAATTTCTCTT 1020 Query: 1021 TGCTTGCATCTTTTTCTTCCATGCCAAAAAATAAAAGATACTCATTTTAAAAGCGCAGCC 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1021 TGCTTGCATCTTTTTCTTCCATGCCAAAAAATAAAAGATACTCATTTTAAAAGCGCAGCC 1080 Query: 1081 ATATTGACTAAGTAAGTAATCATAATACTATGAGTAATTTTTGAGTACTGTGCTCATTTA 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 ATATTGACTAAGTAAGTAATCATAATACTATGAGTAATTTTTGAGTACTGTGCTCATTTA 1140 Query: 1141 CTAGCTGCTTTTCTGAGAAAGATCCTCGATAATCAATTCCAGGTTAGTGGGGCCCTTCTA 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 CTAGCTGCTTTTCTGAGAAAGATCCTCGATAATCAATTCCAGGTTAGTGGGGCCCTTCTA 1200 Query: 1201 CGGCTTCTTCTAACCAATTGTTCCCCGTGAGTTGCTTTCTCTGAAAACCTTATTATACAT 1260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1201 CGGCTTCTTCTAACCAATTGTTCCCCGTGAGTTGCTTTCTCTGAAAACCTTATTATACAT 1260 Query: 1261 TAGAGTTATAAGAAAATTTTCTTTTTCCCGTAGATTAACCTGCAGTGCCGAACTTCTAGA 1320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1261 TAGAGTTATAAGAAAATTTTCTTTTTCCCGTAGATTAACCTGCAGTGCCGAACTTCTAGA 1320 Query: 1321 TGTCACACCAGACCGTTTGACACCGCCATTTTCCTTCCTTTTCGGAAAAATGTGCCGATA 1380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1321 TGTCACACCAGACCGTTTGACACCGCCATTTTCCTTCCTTTTCGGAAAAATGTGCCGATA 1380 Query: 1381 AATGGTAAGACGCGACGCCACTGCTACGAATATTACGCTTATGATGAAGCAAAAGGAAAA 1440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1381 AATGGTAAGACGCGACGCCACTGCTACGAATATTACGCTTATGATGAAGCAAAAGGAAAA 1440 Query: 1441 AGCAAGTTCCCCTTAAATTCGTATAACTGTTTCATCA 1477 ||||||||||||||||||||||||||||||||||||| Sbjct: 1441 AGCAAGTTCCCCTTAAATTCGTATAACTGTTTCATCA 1477 >NOT:H_530378-537758 Chromosome 8 from 530378 to 537758 Length = 7381 Plus Strand HSPs: Score = 7059 (1065.2 bits), Expect = 2.4e-316, P = 2.4e-316 Identities = 1441/1479 (97%), Positives = 1441/1479 (97%), Strand = Plus / Plus Query: 1 AGTTAATGATTCACTGTGCTTTCTGTTGCTGTAGAATTTCTGAGGCATTGTCGCTCTCTT 60 |||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 1 AGTTAATGATTCACTGAGCTTTCTGTTGCTGTAGACTTTCTGAGGCATCGTCGCTCTCTT 60 Query: 61 CTATGTGATGCTACAACGGAACTAGGCTTCTTATATATCGTGGTCCTACAAGATCTTGGT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 CTATGTGATGCTACAACGGAACTAGGCTTCTTATATATCGTGGTCCTACAAGATCTTGGT 120 Query: 121 ATCTCGTTTGCTTACTTTGAAGCTTCACTGATATATAGTATTTAAGCCACTTTCATGTTC 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 121 ATCTCGTTTGCTTACTTTGAAGCTTCACTGATATATAGTATTTAAGCCACTTTTATGTTC 180 Query: 181 ATGGATAATCGTAATTGTACTACGCTGGTACCAGTTATGAACCCTATCAAATCATCATTG 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ATGGATAATCGTAATTGTACTACGCTGGTACCAGTTATGAACCCTATCAAATCATCATTG 240 Query: 241 AACACTGCTATTTTTAACTAATCAAGATGTGTATGCGGCGTACTTTATAATTTCACGACA 300 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 241 AACACTGCTATTTTTAACTAATCAAGATATGTATGCGGCGTACTTTATAATTTCACGACA 300 Query: 301 CTATTGAAAGCAAACTAAAAATCAAGTAAATACCTATCCAAGTTGCGGGCTCTGGATTTA 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 CTATTGAAAGCAAACTAAAAATCAAGTAAATACCTATCCAAGTTGCGGGCTCTGGATTTA 360 Query: 361 TGTGGCCTTAAATTTTCGACCTATGGTTCGCTATTCAATATGAGAAAACCAAAATTAGGT 420 ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 361 TGTGGCCTTAAATTTTCGACCTATGGTTCACTATTCAATACGAGAAAACCAAAATTAGGT 420 Query: 421 ACAAGTACTGATTACGTCCGTGATTCGAAAAGCAGCGTTGAAAGATTACAAGATTTTGCG 480 ||||||||||||| ||| ||||||| ||||||||||||| |||||||||||||||||||| Sbjct: 421 ACAAGTACTGATTGCGTTCGTGATTTGAAAAGCAGCGTTAAAAGATTACAAGATTTTGCG 480 Query: 481 TGTCCAGGCCGACACTTAACTTTAAGGTCTCGACTTAGTAACATGAGTTGCCAAAAGTTT 540 | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 481 TTTCCAGGCCGACACTTAACTTTAAGGTCTCGACTTGGTAACATGAGTTGCCAAAAGTTT 540 Query: 541 TTTTCTCCTATCTGAATATGGGGAACCGGAATTTGTCTTTGACCTGACTTTCAAATTGTT 600 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 541 TTTTCTCCTATCTGAATATGGGGAACCGGAATCTGTCTTTGACCTGACTTTCAAATTGTT 600 Query: 601 GCATATGTNNNNNNNNN-CAGAAGAAATATGATCTTCTTCTTCTAGCGATGCAAAAGGAT 659 |||||||| |||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 601 GCATATGTAAAAAAAAAACAGAAGAAATATTATCTTCTCCTTCTAGCGATGCAAAAGGAT 660 Query: 660 TCATTACAAATCGTCGCAAAGGCCGACAAGTTGCAGTATATTCACATTGCTTATTTGAAG 719 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 661 TCATTACAAATCGTCGCAAAGGCTGACAAGTTGCAGTATATTCACATTGCTTATTTGAAG 720 Query: 720 TATGTTTGTATACACATCGATAGTATTCATTAACACCACAACTGCTGTGTATACTATGTC 779 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 721 TACGTTTGTATACACATCGATAGTATTCATTAACACCACAACTGCTGTGTATACTATGTC 780 Query: 780 AAACAGCATAATAAAGCCCGTCATTTTTGTACCCGCTCATTTCCAATAGGCATCTAAACT 839 |||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 781 AAACAGCACAATAAAGCCCGTCATTTTCGTACCCGCTCATTTCCAATAGGTATCTAAACT 840 Query: 840 TACAAATGTGGTACACTACTTCGAATTCATTAATCGATATTGAATGCTAAAA-GTCTGCG 898 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 841 TACAAATGTGGTACACTACTTCGAATTCATTAATCGATATTGAATGCTAAAAAGTCTGCG 900 Query: 899 ATTTCTTCCTCAACGTTCAAAAATCTCATCCAAGGCATAATCCCACATATTGAAGATCGC 958 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 901 ATTTCTTCCTCAACGTTCAAAAATCTCATCCAAGGCATAATCCCACATATTGAAGATCGC 960 Query: 959 TACCAATTGTTACGGGCGAACTGAGGTTTTGGAAATGAGCTTGTACTTAGTAAATTTCTC 1018 ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 961 TACCAATTGTTACAGGCGAACTGAAGTTTTGGAAATGAGCTTGTACTTAGTAAATTTCTC 1020 Query: 1019 TTTGCTTGCATCTTTTTCTTCCATGCCAAAAAATAAAAGATACTCATTTTAAAAGCGCAG 1078 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1021 TTTGCTTGCATCTTTTTCTTCCATGCCAAAAAATAAAAGATACTCATTTTAAAAACGCAG 1080 Query: 1079 CCATATTGACTAAGTAAGTAATCATAATACTATGAGTAATTTTTGAGTACTGTGCTCATT 1138 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 CCATATTGACTAAGTAAGTAATCATAATACTATGAGTAATTTTTGAGTACTGTGCTCATT 1140 Query: 1139 TACTAGCTGCTTTTCTGAGAAAGATCCTCGATAATCAATTCCAGGTTAGTGGGGCCCTTC 1198 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1141 TACTAGCTGCTTTTCTGAGAAAGATCCTCGATAATCAATTCCAGGTTAGTGGGGCGCTTC 1200 Query: 1199 TACGGCTTCTTCTAACCAATTGTTCCCCGTGAGTTGCTTTCTCTGAAAACCTTATTATAC 1258 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1201 TACGGCCTCTTCTAACCAATTGTTCCCCGTGAGTTGCTTTCTCTGAAAACCTTATTATAC 1260 Query: 1259 ATTAGAGTTATAAGAAAATTTTCTTTTTCCCGTAGATTAACCTGCAGTGCCGAACTTCTA 1318 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1261 ATTAGAGTTATAAGAAAATTTTCTTTTTCCCGTAGATTAACTTGCAGTGCCGAACTTCTA 1320 Query: 1319 GATGTCACACCAGACCGTTTGACACCGCCATTTTCCTTCCTTTTCGGAAAAATGTGCCGA 1378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1321 GATGTCACACCAGACCGTTTGACACCGCCATTTTCCTTCCTTTTCGGAAAAATGTGCCGA 1380 Query: 1379 TAAATGGTAAGACGCGACGCCACTGCTACGAATATTACGCTTATGATGAAGCAAAAGGAA 1438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1381 TAAATGGTAAGACGCGACGCCACTGCTACGAATATTACGCTTATGATGAAGCAAAAGGAA 1440 Query: 1439 AAAGCAAGTTCCCCTTAAATTCGTATAACTGTTTCATCA 1477 ||||||||||||||||||||||||||||||||||||||| Sbjct: 1441 AAAGCAAGTTCCCCTTAAATTCGTATAACTGTTTCATCA 1479 >NOT:A_13744-21526 Chromosome 1 from 13744 to 21526 Length = 7783 Minus Strand HSPs: Score = 2705 (411.9 bits), Expect = 4.8e-118, P = 4.8e-118 Identities = 561/586 (95%), Positives = 561/586 (95%), Strand = Minus / Plus Query: 1477 TGATGAAACAGTTATACGAATTTAAGGGGAACTTGCTTTTTCCTTTTGCTTCATCATAAG 1418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7105 TGATGAAACAGTTATACGAATTTAAGGGGAACTTGCTTTTTCCTTTTGCTTCATCATAAG 7164 Query: 1417 CGTAATATTCGTAGCAGTGGCGTCGCGTCTTACCATTTATCGGCACATTTTTCCGAAAAG 1358 || |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7165 CGCAATATTCGCAGCGGTGGCGTCGCGTCTTACCATTTATCGGCACATTTTTCCGAAAAG 7224 Query: 1357 GAAGGAAAATGGCGGTGTCAAACGGTCTGGTGTGACATCTAGAAGTTCGGCACTGCAGGT 1298 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct: 7225 GAAGGAAAATGGCGGTGTCAAACGGTCTGGTGTGACATCTAGAAGTTCGGCATTGCAAGT 7284 Query: 1297 TAATCTACGGGAAAAAGAAAATTTTCTTATAACTCTAATGTATAATAAGGTTTTCAGAGA 1238 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 7285 TAATCTACGGGAAAAAGAAAATTTTCTTATAACCCTAATGTATAATAAGGTTTTCGGAGA 7344 Query: 1237 AAGCAACTCACGGGGAACAATTGGTTAGAAGAAGCCGTAGAAGGGCCCCACTAACCTGGA 1178 |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| Sbjct: 7345 AAGCAACTCACGGGGAACAATTGGTTAGAAGAGACCGTAGAAGCGCCCCACTAACCTGGA 7404 Query: 1177 ATTGATTATCGAGGATCTTTCTCAGAAAAGCAGCTAGTAAATGAGCACAGTACTCAAAAA 1118 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 7405 GTTGATTATCGAGGATCTTTCTCAGAAAAGCAGCTAATAAATGAGCACAGTACTCAAAAA 7464 Query: 1117 TTACTCATAGTATTATGATTACTTACTTAGTCAATATGGCTGCGCTTTTAAAATGAGTAT 1058 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7465 TTACTCATAGTATTATAATTACTTACTTAGTCAATATGGCTGCGCTTTTAAAATGAGTAT 7524 Query: 1057 CTTTTATTTTTTGGCATGGAAGAAAAAGATGCAAGCAAAGAGAAATTTACTAAGTACAAG 998 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7525 CTTTTATTTTTTGACAAGGAAGAAAAAGATGCAAGCAAAGAGAAATTTACTAAGTACAAG 7584 Query: 997 CTCATTTCCAAAACCTCAGTTCGCCCGTAACAATTGGTAGCGATCTTCAATATGTGGGAT 938 ||||||||||||| |||||| ||| |||||||| ||||||||||||||| || |||||| Sbjct: 7585 CTCATTTCCAAAAATTCAGTTTGCCTGTAACAATGGGTAGCGATCTTCAACATATGGGAT 7644 Query: 937 TATGCCTTGGATGAGATTTTTGAACGTTGAGGAAGAAATCGCAGAC 892 ||||||||| ||||||||||||||||| |||||| ||||||||||| Sbjct: 7645 TATGCCTTGAATGAGATTTTTGAACGTAGAGGAAAAAATCGCAGAC 7690 Score = 440 (72.1 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22 Identities = 138/187 (73%), Positives = 138/187 (73%), Strand = Minus / Plus Query: 884 ATTCAATATCGAT-TAATGAATTCGAAGTAGTGTACCACATTTGTAAGT-T---TAGA-T 831 ||||| | | | ||| ||| | || | | | |||| || | | | | || | Sbjct: 7598 ATTCAGTTTGCCTGTAAC-AATGGGTAGCGATCTTCAACATATGGGATTATGCCTTGAAT 7656 Query: 830 GCC-TATTGGAAATGAGCGGGTACAAAAAT-GACGGGCTTTATTATGCTGTTTGACATAG 773 | | || ||| || || | || ||| ||||||||| ||||||||||||||| Sbjct: 7657 GAGATTTTTGAACGTAGAGGAAAAAATCGCAGACAGGCTTTATTGTGCTGTTTGACATAG 7716 Query: 772 TATACACAGCAGTTGTGGTGTTAATGAATACTATCGATGTGTATACAAACATACTTCAAA 713 ||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 7717 TATACTCAGCCGTTGTGGTGTTAATGAATACTATCGATGTGTATACAAACGTACTTCAAA 7776 Query: 712 TAAGCAA 706 ||||||| Sbjct: 7777 TAAGCAA 7783 Score = 323 (54.5 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22 Identities = 113/163 (69%), Positives = 113/163 (69%), Strand = Minus / Plus Query: 1362 AAAAGGAAGGAAAATGGCGGTGTCAAACGGTCTGGTGTGACATCTAGAAGTTCGGCACTG 1303 ||| || | ||| || ||||||| ||| ||| ||| || ||| || | | ||| Sbjct: 1050 AAATAGATGTCAAAAATCGATGTCAAAAAATCTCGTGAGACCTCCGGAATTTTGACGCTG 1109 Query: 1302 CAGGTTAATCTACGGGAAA-AAGAAAATTTTCTTATAACTCTAATGTATAATAAGGTTTT 1244 || || ||||||||||||| |||||| |||| ||| ||| |||||| | |||||| |||| Sbjct: 1110 CAAGTCAATCTACGGGAAAGAAGAAA-TTTT-TTA-AAC-CTAATGCAAAATAAGCTTTT 1165 Query: 1243 CAGAGAAAGCAAC-TCACGGGGAACAATTGGTTAGAAGAAGCC 1202 | |||| || | || || || ||| | | | |||| Sbjct: 1166 CTTGGAAAATAAGATTTTCGGCAATAAAAGGTAA-ATGCAGCC 1207 Score = 165 (30.8 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22 Identities = 81/132 (61%), Positives = 81/132 (61%), Strand = Minus / Plus Query: 1472 AAACAGTTATACGAATTTAAGGGGAACTTGCTTTTTC-CTTTTGCTTCATCATAAGCGTA 1414 ||| | || ||||| || ||| | || || | |||||||||||||| ||| | | Sbjct: 920 AAATATTTGTACGAGCGGAAAAGGATTATACTCTTCCTCTTTTGCTTCATCACAAGAGGA 979 Query: 1413 ATATTCGTAGCAGTGGCGTCGCGTCTTACCA-TTTATCGGCACATTTTTCCGAAAAGGAA 1355 |||| | | || | | || ||| |||||||| | |||||| || Sbjct: 980 TTATTTTGA-C-GTCGTCTGTTGTACTACTTCTTTATCGGTG--TGCGCAGGAAAAGAAA 1035 Query: 1354 GGAAAATGGCGG 1343 | |||| | || Sbjct: 1036 GAAAAAGGAAGG 1047 >NOT:A_21852-22232 Chromosome 1 from 21852 to 22232 Length = 381 Minus Strand HSPs: Score = 1851 (283.8 bits), Expect = 7.9e-80, P = 7.9e-80 Identities = 375/381 (98%), Positives = 375/381 (98%), Strand = Minus / Plus Query: 381 GGTCGAAAATTTAAGGCCACATAAATCCAGAGCCCGCAACTTGGATAGGTATTTACTTGA 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 GGTCGAAAATTTAAGGCCACATAAATCCAGAGCCCGCAACTTGGATAGGTATTTACTTGA 60 Query: 321 TTTTTAGTTTGCTTTCAATAGTGTCGTGAAATTATAAAGTACGCCGCATACACATCTTGA 262 |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 61 TTTTTAGTTTGCTTTCAATAGTGTCGTGAAATTATAAAGTACGCCGCATATATATCTTGA 120 Query: 261 TTAGTTAAAAATAGCAGTGTTCAATGATGATTTGATAGGGTTCATAACTGGTACCAGCGT 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 TTAGTTAAAAATAGCAGTGTTCAATGATGATTTGATAGGGTTCATAACTGGTACCAGCGT 180 Query: 201 AGTACAATTACGATTATCCATGAACATGAAAGTGGCTTAAATACTATATATCAGTGAAGC 142 ||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||| Sbjct: 181 AGTACAATTACGATTATCCATGAACATAAAAGTGGTTTAAGTACTATATATCAGTGAAGC 240 Query: 141 TTCAAAGTAAGCAAACGAGATACCAAGATCTTGTAGGACCACGATATATAAGAAGCCTAG 82 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 TTCAAAGTAAGCAAACGAGATACCAAGATCTTGTAGGACCACGATATATAAGAAGCCTAG 300 Query: 81 TTCCGTTGTAGCATCACATAGAAGAGAGCGACAATGCCTCAGAAATTCTACAGCAACAGA 22 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 TTCCGTTGTAGCATCACATAGAAGAGAGCGACAATGCCTCAGAAATTCTACAGCAACAGA 360 Query: 21 AAGCACAGTGAATCATTAACT 1 ||||||||||| ||||||||| Sbjct: 361 AAGCACAGTGAGTCATTAACT 381 >NOT:O_522282-523027 Chromosome 15 from 522282 to 523027 Length = 746 Plus Strand HSPs: Score = 200 (36.1 bits), Expect = 0.10, P = 0.096 Identities = 196/349 (56%), Positives = 196/349 (56%), Strand = Plus / Plus Query: 816 TCATTTCCAATAGGCATCTAAACTTACAA-ATGTGGTACACTACTTCGAATTCAT-TAAT 873 | ||||| | |||||| |||| | | | || || ||| | |||| | || | | Sbjct: 299 TTATTTC--ACAGGCATTTAAAATAAGAGCATTGGGCACAGT-CTTCTTTTATATGTTGT 355 Query: 874 CGATATTGAATG-CTAAAAGTCTG-CGATTTCTTCCTCAACGTTCAAAAATC-TCATCCA 930 | ||||| || ||||| | | | | | | | || ||| || | | || Sbjct: 356 C-ATATTCAAACACTAAACATTTATCTGTATAGTAATTAATGTTAGCTCTTCCTTCTGCA 414 Query: 931 AGGCATAATCCCACATATTGAAGATCG-CTACCAATTGTTACGGGCGAACTGAGGTTTTG 989 ||| | | ||| | | ||| ||| | || || ||| | | | | | Sbjct: 415 TGGCGCT-TGTTATATACTTCAT-TCGTCTATTT-TGGTGCCGCGCGCCATCATGGTCCG 471 Query: 990 GAAATGAGCTTGTACTTAGTAAATTTCTCTTTGCTTGCATCTTTTTCTTCCATGCCAAAA 1049 | || | | | ||| | | | | | | ||| || ||||| |||| || |||||||| Sbjct: 472 GTAACG-G-TCGTAGTGAATGACTCA-TATTT--TTCCATCTCTTTCGGCCTTGCCAAAA 526 Query: 1050 AATAAAAGATACTCATTTTAAAAGCGCAGCCAT-ATTGACTAAGTA-AGTAATCATAA-T 1106 ||| ||| | | | |||| | || | || | || || ||||| || | Sbjct: 527 AATGAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAAAAACGATGTCCAG-AATCACAACT 585 Query: 1107 ACTATGAGTAATTTTTGAG-T-ACTGTGCTCATTTACTAGCT-GCTTTT 1152 || | | || |||| | |||| ||| || || | ||| || Sbjct: 586 ACAAC-A-TAGTTTTGCCTCTTACTG-GCTTGATTGGAAGTTAGCTGTT 631 Parameters: E=10 B=100 V=100 filter=dust ctxfactor=2.00 Q=10 R=10 Query ----- As Used ----- ----- Computed ---- Strand MatID Matrix name Lambda K H Lambda K H +1 0 +5,-4 0.192 0.182 0.357 same same same Q=10,R=10 0.104 0.0151 0.0600 n/a n/a n/a -1 0 +5,-4 0.192 0.182 0.357 same same same Q=10,R=10 0.104 0.0151 0.0600 n/a n/a n/a Query Strand MatID Length Eff.Length E S W T X E2 S2 +1 0 1477 1468 10. 156 11 n/a 73 0.021 83 134 0.023 124 -1 0 1477 1468 10. 156 11 n/a 73 0.021 83 134 0.023 124 Statistics: Database: intergenic Title: intergenic.fna Posted: 3:48:20 PM EST Nov 10, 2004 Created: 3:48:20 PM EST Nov 10, 2004 Format: XDF-1 # of letters in database: 3,015,920 # of sequences in database: 6414 # of database sequences satisfying E: 5 No. of states in DFA: 257 (257 KB) Total size of DFA: 324 KB (2082 KB) Time to generate neighborhood: 0.03u 0.00s 0.03t Elapsed: 00:00:00 No. of threads or processors used: 4 Search cpu time: 0.12u 0.06s 0.18t Elapsed: 00:00:00 Total cpu time: 0.94u 0.56s 1.50t Elapsed: 00:00:00 Start: Wed Jan 12 11:12:09 2005 End: Wed Jan 12 11:12:09 2005 EXIT CODE 0